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NSFL1C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.7 nTPM
HPA:39.7 nTPM
GTEx:27.8 nTPM
FANTOM5:64.2 Scaled Tags Per Million
Pig:59.4 nTPM
Mouse:112.7 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047108Antibody HPA050628
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.7
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
2621 Female, age 67, right hemisphere 37.9
1898 Male, age 80, left hemisphere 36.6
1855 Male, age 76, left hemisphere 36.3
2148 Female, age 91, left hemisphere 35.8
2529 Female, age 94, left hemisphere 35.4
1911 Female, age 85, right hemisphere 34.0
Dentate gyrus
nTPM: 35.9
2246 Female, age 85, both hemispheres 36.9
2531 Female, age 67, both hemispheres 36.3
1927 Female, age 91, both hemispheres 35.9
2528 Male, age 74, both hemispheres 35.7
2530 Female, age 94, left hemisphere 35.6
2010 Male, age 76, both hemispheres 35.1
Entorhinal gyrus
nTPM: 37.6
1938 Female, age 85, left hemisphere 38.4
2613 Female, age 94, left hemisphere 38.3
1787 Male, age 76, left hemisphere 38.2
2764 Male, age 80, right hemisphere 38.2
2686 Male, age 75, right hemisphere 36.8
2117 Female, age 91, right hemisphere 35.5
Hippocampus, CA1
nTPM: 36.8
2749 Male, age 80, left hemisphere 38.4
2045 Male, age 76, both hemispheres 36.7
1873 Female, age 85, both hemispheres 36.5
2527 Male, age 74, both hemispheres 36.3
2082 Female, age 91, right hemisphere 35.9
Hippocampus, CA2
nTPM: 36.1
1892 Male, age 76, both hemispheres 37.8
2249 Male, age 74, both hemispheres 36.6
1940 Female, age 85, left hemisphere 35.6
2113 Female, age 91, right hemisphere 35.5
2437 Female, age 94, left hemisphere 35.5
1963 Male, age 80, left hemisphere 35.4
Hippocampus, CA3
nTPM: 37.5
2436 Male, age 74, both hemispheres 39.6
2620 Female, age 94, left hemisphere 39.2
2137 Male, age 80, left hemisphere 37.3
1867 Male, age 76, both hemispheres 37.2
2861 Female, age 67, both hemispheres 36.3
1891 Female, age 85, both hemispheres 35.4
Parahippocampal cortex
nTPM: 37.3
1850 Male, age 80, both hemispheres 40.6
2532 Female, age 72, left hemisphere 38.7
2622 Female, age 67, right hemisphere 38.4
2245 Female, age 91, both hemispheres 37.5
1990 Female, age 91, right hemisphere 37.2
2692 Male, age 74, both hemispheres 36.9
2693 Female, age 94, both hemispheres 36.7
1933 Female, age 85, both hemispheres 36.6
2018 Male, age 76, both hemispheres 35.5
2250 Female, age 67, right hemisphere 35.1
Perirhinal gyrus
nTPM: 39.7
1794 Male, age 80, right hemisphere 41.6
1847 Female, age 91, left hemisphere 41.0
2848 Male, age 76, right hemisphere 39.5
1841 Female, age 85, right hemisphere 39.4
2521 Female, age 94, right hemisphere 37.0
Subiculum
nTPM: 35.8
1977 Female, age 85, both hemispheres 37.6
2619 Male, age 74, both hemispheres 36.5
1901 Male, age 80, both hemispheres 35.9
2438 Female, age 94, left hemisphere 35.6
2042 Male, age 76, both hemispheres 34.6
2729 Female, age 91, right hemisphere 34.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 50.4
Min nTPM: 13.8
Std nTPM: 5.2
Median nTPM: 26.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 50.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 48.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 47.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 42.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 41.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 38.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 37.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 36.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.2
FF:10153-102I9 76 years, female 67.8
FF:10169-103B7 60 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.4
Samples: 4

Max nTPM: 73.2
Min nTPM: 46.7
Sample A Female 73.2
Sample B Female 56.2
Sample C Male 61.6
Sample D Male 46.7
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 64.5
Min nTPM: 46.1
Sample A Female 64.5
Sample B Female 53.1
Sample C Male 59.6
Sample D Male 46.1
Subiculum
nTPM: 57.8
Samples: 4

Max nTPM: 70.8
Min nTPM: 52.0
Sample A Female 70.8
Sample B Female 52.0
Sample C Male 55.3
Sample D Male 53.0
Ventral hippocampus
nTPM: 55.5
Samples: 4

Max nTPM: 66.4
Min nTPM: 40.7
Sample A Female 55.3
Sample B Female 40.7
Sample C Male 66.4
Sample D Male 59.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.4
Samples: 4

Max nTPM: 114.4
Min nTPM: 102.4
Sample A Male 102.4
Sample B Male 112.1
Sample C Female 112.6
Sample D Female 114.4
Hippocampal formation
nTPM: 112.7
Samples: 4

Max nTPM: 123.9
Min nTPM: 105.3
Sample A Male 123.9
Sample B Male 105.3
Sample C Female 111.5
Sample D Female 110.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
69782413 Antisense, RP_050505_02_H12, Mouse strain C57BL/6J (56 days, male) 8.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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