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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		73.491
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:41.3 nTPM
FANTOM5:88.3 Scaled Tags Per Million
Pig:78.5 nTPM
Mouse:250.9 nTPM
Allen mouse:23.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA012602
Amygdala mean intensity 73.491
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 24.537
Basal medial amygdaloid nucleus 53.986
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 47.858
Cortical amygdala 63.639
Central amygdala 58.524
Medial amygdaloid nucleus 57.913

AMYGDALA - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Amygdala
nTPM: 0.4
2517 Female, age 94, left hemisphere 1.2
1987 Female, age 91, left hemisphere 1.0
2514 Male, age 75, right hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 17.1
2243 Female, age 91, right hemisphere 67.5
2685 Female, age 94, left hemisphere 20.0
2110 Male, age 80, left hemisphere 15.3
1955 Male, age 76, both hemispheres 0.0
2609 Male, age 75, right hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 3.8
2239 Male, age 80, left hemisphere 19.2
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 16.9
2829 Male, age 80, left hemisphere 41.7
2242 Female, age 91, right hemisphere 38.4
2535 Female, age 67, right hemisphere 12.8
2429 Female, age 94, left hemisphere 8.6
2240 Male, age 76, both hemispheres 0.0
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 0.7
2534 Female, age 94, left hemisphere 4.2
1883 Male, age 76, both hemispheres 0.0
2255 Female, age 91, right hemisphere 0.0
2256 Male, age 80, left hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 12.0
2486 Female, age 94, both hemispheres 15.1
1974 Female, age 91, both hemispheres 13.6
2201 Male, age 74, unknown 7.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 41.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 41.3
Samples: 152

Max nTPM: 188.9
Min nTPM: 1.6
Std nTPM: 34.6
Median nTPM: 32.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 188.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 170.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 166.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 156.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 148.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 136.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 105.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 104.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 103.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 102.0
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 99.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 88.3
FF:10151-102I7 76 years, female 88.3

AMYGDALA - Pig RNA-seqi
Average nTPM 78.5
Pig sample Sample description nTPM
Amygdala
nTPM: 78.5
Samples: 4

Max nTPM: 161.9
Min nTPM: 32.8
Sample A Female 161.9
Sample B Female 32.8
Sample C Male 53.9
Sample D Male 65.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 250.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 251.0
Samples: 4

Max nTPM: 265.8
Min nTPM: 218.4
Sample A Male 257.1
Sample B Male 218.4
Sample C Female 262.5
Sample D Female 265.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 23.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 23.8
70743886 Antisense, RP_050725_01_H10, Mouse strain C57BL/6J (56 days, male) 23.8
73834103 Antisense, RP_050725_01_H10, Mouse strain C57BL/6J (56 days, male) 21.2

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.