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NECAP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.5 nTPM
HPA:25.5 nTPM
GTEx:28.7 nTPM
FANTOM5:182.7 Scaled Tags Per Million
Pig:94.1 nTPM
Mouse:195.2 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063300
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
1898 Male, age 80, left hemisphere 22.7
2621 Female, age 67, right hemisphere 17.4
2148 Female, age 91, left hemisphere 13.9
1855 Male, age 76, left hemisphere 13.2
1911 Female, age 85, right hemisphere 7.1
2529 Female, age 94, left hemisphere 5.8
Dentate gyrus
nTPM: 16.7
1927 Female, age 91, both hemispheres 33.4
2531 Female, age 67, both hemispheres 15.2
2010 Male, age 76, both hemispheres 14.5
2528 Male, age 74, both hemispheres 12.9
2246 Female, age 85, both hemispheres 12.3
2530 Female, age 94, left hemisphere 11.9
Entorhinal gyrus
nTPM: 12.6
2764 Male, age 80, right hemisphere 21.0
1938 Female, age 85, left hemisphere 18.0
2613 Female, age 94, left hemisphere 12.6
1787 Male, age 76, left hemisphere 11.6
2686 Male, age 75, right hemisphere 7.1
2117 Female, age 91, right hemisphere 5.3
Hippocampus, CA1
nTPM: 19.6
2749 Male, age 80, left hemisphere 39.3
1873 Female, age 85, both hemispheres 18.1
2527 Male, age 74, both hemispheres 16.4
2045 Male, age 76, both hemispheres 14.2
2082 Female, age 91, right hemisphere 9.9
Hippocampus, CA2
nTPM: 14.6
1963 Male, age 80, left hemisphere 25.9
2249 Male, age 74, both hemispheres 20.4
1892 Male, age 76, both hemispheres 20.2
2113 Female, age 91, right hemisphere 8.5
2437 Female, age 94, left hemisphere 7.4
1940 Female, age 85, left hemisphere 5.5
Hippocampus, CA3
nTPM: 16.3
2137 Male, age 80, left hemisphere 25.8
2436 Male, age 74, both hemispheres 19.8
2620 Female, age 94, left hemisphere 17.9
1867 Male, age 76, both hemispheres 16.3
2861 Female, age 67, both hemispheres 9.5
1891 Female, age 85, both hemispheres 8.2
Parahippocampal cortex
nTPM: 13.5
1850 Male, age 80, both hemispheres 21.9
1990 Female, age 91, right hemisphere 20.9
2245 Female, age 91, both hemispheres 19.3
2250 Female, age 67, right hemisphere 17.7
1933 Female, age 85, both hemispheres 16.7
2532 Female, age 72, left hemisphere 11.7
2018 Male, age 76, both hemispheres 11.2
2693 Female, age 94, both hemispheres 9.2
2622 Female, age 67, right hemisphere 4.5
2692 Male, age 74, both hemispheres 1.7
Perirhinal gyrus
nTPM: 25.5
1847 Female, age 91, left hemisphere 42.1
2521 Female, age 94, right hemisphere 29.0
1794 Male, age 80, right hemisphere 23.3
1841 Female, age 85, right hemisphere 19.9
2848 Male, age 76, right hemisphere 13.1
Subiculum
nTPM: 8.4
1977 Female, age 85, both hemispheres 16.6
1901 Male, age 80, both hemispheres 13.5
2438 Female, age 94, left hemisphere 8.1
2729 Female, age 91, right hemisphere 5.6
2619 Male, age 74, both hemispheres 3.6
2042 Male, age 76, both hemispheres 2.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.7
Samples: 197

Max nTPM: 97.9
Min nTPM: 3.7
Std nTPM: 18.7
Median nTPM: 23.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 97.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 82.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 79.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 77.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 74.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 74.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 73.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 73.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 72.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 70.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 70.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.7
FF:10169-103B7 60 years, female 281.4
FF:10153-102I9 76 years, female 83.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.1
Samples: 4

Max nTPM: 120.1
Min nTPM: 73.7
Sample A Female 120.1
Sample B Female 97.5
Sample C Male 84.9
Sample D Male 73.7
Entorhinal cortex
nTPM: 82.4
Samples: 4

Max nTPM: 92.7
Min nTPM: 70.6
Sample A Female 84.5
Sample B Female 92.7
Sample C Male 81.9
Sample D Male 70.6
Subiculum
nTPM: 81.8
Samples: 4

Max nTPM: 111.1
Min nTPM: 67.2
Sample A Female 111.1
Sample B Female 71.7
Sample C Male 77.3
Sample D Male 67.2
Ventral hippocampus
nTPM: 91.5
Samples: 4

Max nTPM: 102.9
Min nTPM: 65.1
Sample A Female 98.0
Sample B Female 65.1
Sample C Male 102.9
Sample D Male 99.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 195.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.3
Samples: 4

Max nTPM: 188.8
Min nTPM: 162.6
Sample A Male 162.6
Sample B Male 177.8
Sample C Female 184.1
Sample D Female 188.8
Hippocampal formation
nTPM: 195.3
Samples: 4

Max nTPM: 208.1
Min nTPM: 181.4
Sample A Male 208.1
Sample B Male 192.3
Sample C Female 199.2
Sample D Female 181.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
69169421 Antisense, RP_050321_03_E07, Mouse strain C57BL/6J (56 days, male) 9.6

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