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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:114.0 nTPM
HPA:114.0 nTPM
GTEx:186.6 nTPM
FANTOM5:248.7 Scaled Tags Per Million
Pig:102.2 nTPM
Mouse:160.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030501Antibody HPA045621
Glial cells Not detectedLow
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.0
Sample id Sample description nTPM
Hippocampus
nTPM: 85.2
2621 Female, age 67, right hemisphere 95.9
1898 Male, age 80, left hemisphere 90.0
2529 Female, age 94, left hemisphere 85.8
2148 Female, age 91, left hemisphere 84.2
1855 Male, age 76, left hemisphere 80.9
1911 Female, age 85, right hemisphere 74.1
Dentate gyrus
nTPM: 86.6
2530 Female, age 94, left hemisphere 102.2
1927 Female, age 91, both hemispheres 93.0
2531 Female, age 67, both hemispheres 86.3
2246 Female, age 85, both hemispheres 84.6
2528 Male, age 74, both hemispheres 77.5
2010 Male, age 76, both hemispheres 75.8
Entorhinal gyrus
nTPM: 100.2
2764 Male, age 80, right hemisphere 117.0
2613 Female, age 94, left hemisphere 113.4
1787 Male, age 76, left hemisphere 106.6
1938 Female, age 85, left hemisphere 96.6
2686 Male, age 75, right hemisphere 87.7
2117 Female, age 91, right hemisphere 79.9
Hippocampus, CA1
nTPM: 86.2
2749 Male, age 80, left hemisphere 107.7
1873 Female, age 85, both hemispheres 84.0
2527 Male, age 74, both hemispheres 80.2
2045 Male, age 76, both hemispheres 79.8
2082 Female, age 91, right hemisphere 79.2
Hippocampus, CA2
nTPM: 89.0
1892 Male, age 76, both hemispheres 103.0
2437 Female, age 94, left hemisphere 98.8
1940 Female, age 85, left hemisphere 93.5
1963 Male, age 80, left hemisphere 81.9
2113 Female, age 91, right hemisphere 80.5
2249 Male, age 74, both hemispheres 76.5
Hippocampus, CA3
nTPM: 83.1
2620 Female, age 94, left hemisphere 100.8
2861 Female, age 67, both hemispheres 98.8
1867 Male, age 76, both hemispheres 82.0
2137 Male, age 80, left hemisphere 76.3
1891 Female, age 85, both hemispheres 73.2
2436 Male, age 74, both hemispheres 67.3
Parahippocampal cortex
nTPM: 100.9
2532 Female, age 72, left hemisphere 117.7
2622 Female, age 67, right hemisphere 111.9
1850 Male, age 80, both hemispheres 108.1
2245 Female, age 91, both hemispheres 107.3
2693 Female, age 94, both hemispheres 98.5
1990 Female, age 91, right hemisphere 98.2
1933 Female, age 85, both hemispheres 97.4
2250 Female, age 67, right hemisphere 94.0
2692 Male, age 74, both hemispheres 91.9
2018 Male, age 76, both hemispheres 84.2
Perirhinal gyrus
nTPM: 114.0
1794 Male, age 80, right hemisphere 133.6
1847 Female, age 91, left hemisphere 120.6
1841 Female, age 85, right hemisphere 112.4
2521 Female, age 94, right hemisphere 104.4
2848 Male, age 76, right hemisphere 99.0
Subiculum
nTPM: 84.0
2619 Male, age 74, both hemispheres 104.6
1977 Female, age 85, both hemispheres 89.7
2438 Female, age 94, left hemisphere 89.5
1901 Male, age 80, both hemispheres 82.7
2042 Male, age 76, both hemispheres 69.5
2729 Female, age 91, right hemisphere 68.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 186.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 186.6
Samples: 197

Max nTPM: 400.1
Min nTPM: 44.3
Std nTPM: 60.1
Median nTPM: 180.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 400.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 364.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 362.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 336.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 324.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 321.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 319.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 311.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 304.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 301.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 288.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 248.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 248.7
FF:10153-102I9 76 years, female 262.1
FF:10169-103B7 60 years, female 235.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 102.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 100.9
Samples: 4

Max nTPM: 134.2
Min nTPM: 80.6
Sample A Female 134.2
Sample B Female 101.1
Sample C Male 87.8
Sample D Male 80.6
Entorhinal cortex
nTPM: 101.4
Samples: 4

Max nTPM: 113.9
Min nTPM: 85.8
Sample A Female 109.3
Sample B Female 113.9
Sample C Male 96.5
Sample D Male 85.8
Subiculum
nTPM: 90.7
Samples: 4

Max nTPM: 129.6
Min nTPM: 73.3
Sample A Female 129.6
Sample B Female 82.7
Sample C Male 77.2
Sample D Male 73.3
Ventral hippocampus
nTPM: 102.2
Samples: 4

Max nTPM: 125.6
Min nTPM: 72.9
Sample A Female 125.6
Sample B Female 72.9
Sample C Male 124.1
Sample D Male 86.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 160.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.5
Samples: 4

Max nTPM: 188.9
Min nTPM: 140.4
Sample A Male 163.3
Sample B Male 188.9
Sample C Female 149.4
Sample D Female 140.4
Hippocampal formation
nTPM: 142.4
Samples: 4

Max nTPM: 167.7
Min nTPM: 119.5
Sample A Male 137.8
Sample B Male 144.4
Sample C Female 119.5
Sample D Female 167.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
75214942 Antisense, RP_060427_01_A10, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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