ABOUTMENU
HELP
NEWS
STRN4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:32.5 nTPM
HPA:32.5 nTPM
GTEx:43.4 nTPM
FANTOM5:35.1 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:125.5 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043527Antibody HPA056706
Glial cells Not detectedMedium
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.5
Sample id Sample description nTPM
Hippocampus
nTPM: 29.2
2621 Female, age 67, right hemisphere 32.3
2148 Female, age 91, left hemisphere 30.7
1855 Male, age 76, left hemisphere 28.8
2529 Female, age 94, left hemisphere 28.3
1911 Female, age 85, right hemisphere 27.7
1898 Male, age 80, left hemisphere 27.4
Dentate gyrus
nTPM: 30.1
2531 Female, age 67, both hemispheres 40.1
1927 Female, age 91, both hemispheres 30.0
2530 Female, age 94, left hemisphere 29.6
2246 Female, age 85, both hemispheres 27.3
2528 Male, age 74, both hemispheres 26.8
2010 Male, age 76, both hemispheres 26.7
Entorhinal gyrus
nTPM: 28.5
2613 Female, age 94, left hemisphere 35.2
1787 Male, age 76, left hemisphere 30.8
2764 Male, age 80, right hemisphere 28.3
1938 Female, age 85, left hemisphere 27.9
2686 Male, age 75, right hemisphere 25.6
2117 Female, age 91, right hemisphere 23.2
Hippocampus, CA1
nTPM: 29.1
2749 Male, age 80, left hemisphere 37.6
2045 Male, age 76, both hemispheres 30.5
1873 Female, age 85, both hemispheres 29.5
2527 Male, age 74, both hemispheres 27.3
2082 Female, age 91, right hemisphere 20.8
Hippocampus, CA2
nTPM: 26.5
1963 Male, age 80, left hemisphere 32.3
1892 Male, age 76, both hemispheres 31.1
2437 Female, age 94, left hemisphere 28.7
1940 Female, age 85, left hemisphere 24.4
2249 Male, age 74, both hemispheres 22.0
2113 Female, age 91, right hemisphere 20.2
Hippocampus, CA3
nTPM: 32.5
2861 Female, age 67, both hemispheres 43.8
2620 Female, age 94, left hemisphere 37.8
2137 Male, age 80, left hemisphere 37.0
1867 Male, age 76, both hemispheres 29.4
1891 Female, age 85, both hemispheres 24.9
2436 Male, age 74, both hemispheres 22.4
Parahippocampal cortex
nTPM: 25.6
2622 Female, age 67, right hemisphere 29.7
2245 Female, age 91, both hemispheres 27.6
1933 Female, age 85, both hemispheres 27.4
2532 Female, age 72, left hemisphere 25.8
1990 Female, age 91, right hemisphere 24.7
2693 Female, age 94, both hemispheres 24.6
2018 Male, age 76, both hemispheres 24.2
1850 Male, age 80, both hemispheres 24.0
2692 Male, age 74, both hemispheres 24.0
2250 Female, age 67, right hemisphere 23.7
Perirhinal gyrus
nTPM: 25.2
1794 Male, age 80, right hemisphere 27.1
1847 Female, age 91, left hemisphere 26.4
2521 Female, age 94, right hemisphere 25.9
1841 Female, age 85, right hemisphere 23.8
2848 Male, age 76, right hemisphere 22.9
Subiculum
nTPM: 26.5
1901 Male, age 80, both hemispheres 28.1
1977 Female, age 85, both hemispheres 27.8
2438 Female, age 94, left hemisphere 26.9
2042 Male, age 76, both hemispheres 26.1
2619 Male, age 74, both hemispheres 25.6
2729 Female, age 91, right hemisphere 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.4
Samples: 197

Max nTPM: 97.1
Min nTPM: 15.7
Std nTPM: 13.4
Median nTPM: 43.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 97.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 83.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 78.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 75.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 75.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 69.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 69.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 67.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 67.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.1
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 30.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 52.5
Min nTPM: 35.3
Sample A Female 52.5
Sample B Female 48.4
Sample C Male 35.3
Sample D Male 39.3
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 37.2
Min nTPM: 32.2
Sample A Female 33.6
Sample B Female 32.2
Sample C Male 37.2
Sample D Male 32.4
Subiculum
nTPM: 33.2
Samples: 4

Max nTPM: 43.0
Min nTPM: 28.7
Sample A Female 43.0
Sample B Female 30.8
Sample C Male 30.2
Sample D Male 28.7
Ventral hippocampus
nTPM: 38.1
Samples: 4

Max nTPM: 59.1
Min nTPM: 27.8
Sample A Female 27.8
Sample B Female 28.6
Sample C Male 37.0
Sample D Male 59.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.5
Samples: 4

Max nTPM: 132.6
Min nTPM: 117.3
Sample A Male 124.5
Sample B Male 132.6
Sample C Female 117.3
Sample D Female 127.7
Hippocampal formation
nTPM: 125.4
Samples: 4

Max nTPM: 130.8
Min nTPM: 118.9
Sample A Male 118.9
Sample B Male 130.8
Sample C Female 128.7
Sample D Female 123.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
69887403 Antisense, RP_050512_03_F05, Mouse strain C57BL/6J (56 days, male) 14.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.