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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:11.9 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:34.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003579
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
1898 Male, age 80, left hemisphere 12.8
1911 Female, age 85, right hemisphere 11.8
1855 Male, age 76, left hemisphere 11.7
2621 Female, age 67, right hemisphere 11.5
2529 Female, age 94, left hemisphere 11.2
2148 Female, age 91, left hemisphere 11.1
Dentate gyrus
nTPM: 11.4
1927 Female, age 91, both hemispheres 11.9
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.4
2246 Female, age 85, both hemispheres 11.4
2531 Female, age 67, both hemispheres 11.3
2530 Female, age 94, left hemisphere 11.1
Entorhinal gyrus
nTPM: 11.4
2613 Female, age 94, left hemisphere 11.7
1787 Male, age 76, left hemisphere 11.6
1938 Female, age 85, left hemisphere 11.5
2686 Male, age 75, right hemisphere 11.4
2117 Female, age 91, right hemisphere 11.2
2764 Male, age 80, right hemisphere 10.9
Hippocampus, CA1
nTPM: 11.5
2749 Male, age 80, left hemisphere 12.7
1873 Female, age 85, both hemispheres 11.4
2045 Male, age 76, both hemispheres 11.3
2082 Female, age 91, right hemisphere 11.1
2527 Male, age 74, both hemispheres 11.1
Hippocampus, CA2
nTPM: 11.9
1892 Male, age 76, both hemispheres 14.8
2249 Male, age 74, both hemispheres 11.7
2113 Female, age 91, right hemisphere 11.4
1940 Female, age 85, left hemisphere 11.3
1963 Male, age 80, left hemisphere 11.2
2437 Female, age 94, left hemisphere 11.2
Hippocampus, CA3
nTPM: 11.9
1867 Male, age 76, both hemispheres 13.3
2137 Male, age 80, left hemisphere 12.3
2620 Female, age 94, left hemisphere 12.0
1891 Female, age 85, both hemispheres 11.4
2436 Male, age 74, both hemispheres 11.3
2861 Female, age 67, both hemispheres 10.8
Parahippocampal cortex
nTPM: 11.5
2693 Female, age 94, both hemispheres 12.1
2250 Female, age 67, right hemisphere 12.0
2018 Male, age 76, both hemispheres 11.8
1850 Male, age 80, both hemispheres 11.7
1990 Female, age 91, right hemisphere 11.7
1933 Female, age 85, both hemispheres 11.4
2245 Female, age 91, both hemispheres 11.3
2532 Female, age 72, left hemisphere 11.3
2692 Male, age 74, both hemispheres 11.3
2622 Female, age 67, right hemisphere 10.9
Perirhinal gyrus
nTPM: 11.6
1841 Female, age 85, right hemisphere 12.0
1847 Female, age 91, left hemisphere 11.7
1794 Male, age 80, right hemisphere 11.5
2521 Female, age 94, right hemisphere 11.5
2848 Male, age 76, right hemisphere 11.5
Subiculum
nTPM: 11.5
1901 Male, age 80, both hemispheres 11.9
1977 Female, age 85, both hemispheres 11.7
2438 Female, age 94, left hemisphere 11.6
2729 Female, age 91, right hemisphere 11.5
2042 Male, age 76, both hemispheres 11.3
2619 Male, age 74, both hemispheres 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 23.2
Min nTPM: 6.0
Std nTPM: 3.5
Median nTPM: 11.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 23.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 22.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 21.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 20.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 19.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 19.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 18.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 18.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.2
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 49.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 33.9
Min nTPM: 24.9
Sample A Female 33.9
Sample B Female 28.9
Sample C Male 30.9
Sample D Male 24.9
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 28.0
Min nTPM: 22.1
Sample A Female 25.8
Sample B Female 28.0
Sample C Male 24.0
Sample D Male 22.1
Subiculum
nTPM: 24.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 22.5
Sample A Female 27.0
Sample B Female 22.5
Sample C Male 23.3
Sample D Male 26.7
Ventral hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 30.8
Min nTPM: 20.9
Sample A Female 30.8
Sample B Female 24.3
Sample C Male 20.9
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 32.9
Min nTPM: 27.8
Sample A Male 30.6
Sample B Male 31.3
Sample C Female 32.9
Sample D Female 27.8
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 41.5
Min nTPM: 30.5
Sample A Male 41.5
Sample B Male 31.6
Sample C Female 30.5
Sample D Female 34.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.