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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:24.3 nTPM
HPA:24.3 nTPM
GTEx:20.5 nTPM
FANTOM5:27.3 Scaled Tags Per Million
Pig:19.6 nTPM
Mouse:8.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017910Antibody HPA019492Antibody CAB008096
Glial cells MediumMediumMedium
Neuronal cells Not detectedHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1911 Female, age 85, right hemisphere 17.1
2529 Female, age 94, left hemisphere 17.0
1898 Male, age 80, left hemisphere 15.2
2621 Female, age 67, right hemisphere 14.9
2148 Female, age 91, left hemisphere 14.5
1855 Male, age 76, left hemisphere 12.9
Dentate gyrus
nTPM: 17.6
2530 Female, age 94, left hemisphere 26.6
2010 Male, age 76, both hemispheres 22.7
2528 Male, age 74, both hemispheres 18.9
2246 Female, age 85, both hemispheres 16.2
2531 Female, age 67, both hemispheres 11.6
1927 Female, age 91, both hemispheres 9.9
Entorhinal gyrus
nTPM: 18.6
2117 Female, age 91, right hemisphere 24.9
2764 Male, age 80, right hemisphere 22.9
2686 Male, age 75, right hemisphere 17.7
1938 Female, age 85, left hemisphere 15.8
1787 Male, age 76, left hemisphere 15.3
2613 Female, age 94, left hemisphere 15.0
Hippocampus, CA1
nTPM: 13.6
2082 Female, age 91, right hemisphere 19.3
1873 Female, age 85, both hemispheres 15.8
2527 Male, age 74, both hemispheres 15.2
2045 Male, age 76, both hemispheres 9.7
2749 Male, age 80, left hemisphere 8.0
Hippocampus, CA2
nTPM: 17.8
2249 Male, age 74, both hemispheres 20.5
1963 Male, age 80, left hemisphere 20.3
1940 Female, age 85, left hemisphere 19.4
2437 Female, age 94, left hemisphere 19.1
2113 Female, age 91, right hemisphere 17.7
1892 Male, age 76, both hemispheres 9.9
Hippocampus, CA3
nTPM: 11.4
1891 Female, age 85, both hemispheres 21.7
1867 Male, age 76, both hemispheres 12.8
2436 Male, age 74, both hemispheres 12.1
2620 Female, age 94, left hemisphere 9.0
2137 Male, age 80, left hemisphere 7.5
2861 Female, age 67, both hemispheres 5.2
Parahippocampal cortex
nTPM: 14.9
2692 Male, age 74, both hemispheres 24.4
2532 Female, age 72, left hemisphere 22.2
2018 Male, age 76, both hemispheres 19.8
1990 Female, age 91, right hemisphere 17.4
1850 Male, age 80, both hemispheres 14.7
1933 Female, age 85, both hemispheres 12.9
2693 Female, age 94, both hemispheres 12.8
2245 Female, age 91, both hemispheres 11.6
2250 Female, age 67, right hemisphere 6.8
2622 Female, age 67, right hemisphere 6.5
Perirhinal gyrus
nTPM: 10.5
2521 Female, age 94, right hemisphere 13.1
2848 Male, age 76, right hemisphere 12.6
1794 Male, age 80, right hemisphere 9.9
1847 Female, age 91, left hemisphere 8.8
1841 Female, age 85, right hemisphere 8.2
Subiculum
nTPM: 24.3
2042 Male, age 76, both hemispheres 37.6
1901 Male, age 80, both hemispheres 28.2
1977 Female, age 85, both hemispheres 23.5
2438 Female, age 94, left hemisphere 21.6
2619 Male, age 74, both hemispheres 18.3
2729 Female, age 91, right hemisphere 16.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 61.4
Min nTPM: 7.1
Std nTPM: 10.0
Median nTPM: 18.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 61.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 47.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 46.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 44.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 43.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 43.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 42.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 41.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 41.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.3
FF:10153-102I9 76 years, female 35.9
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 25.2
Min nTPM: 12.5
Sample A Female 25.2
Sample B Female 18.1
Sample C Male 22.6
Sample D Male 12.5
Entorhinal cortex
nTPM: 11.2
Samples: 4

Max nTPM: 11.9
Min nTPM: 10.5
Sample A Female 11.1
Sample B Female 11.4
Sample C Male 11.9
Sample D Male 10.5
Subiculum
nTPM: 12.8
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.8
Sample A Female 14.0
Sample B Female 14.5
Sample C Male 11.9
Sample D Male 10.8
Ventral hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 18.4
Min nTPM: 12.1
Sample A Female 18.4
Sample B Female 12.1
Sample C Male 16.3
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 3.4
Sample A Male 6.5
Sample B Male 5.0
Sample C Female 5.2
Sample D Female 3.4
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 8.1
Sample C Female 10.5
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73584861 Antisense, RP_051206_01_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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