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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.1 nTPM
HPA:34.1 nTPM
GTEx:34.7 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:16.4 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 33.0
2529 Female, age 94, left hemisphere 34.1
1898 Male, age 80, left hemisphere 34.0
1911 Female, age 85, right hemisphere 34.0
1855 Male, age 76, left hemisphere 33.5
2148 Female, age 91, left hemisphere 32.6
2621 Female, age 67, right hemisphere 30.0
Dentate gyrus
nTPM: 33.6
2528 Male, age 74, both hemispheres 36.2
2010 Male, age 76, both hemispheres 35.4
2530 Female, age 94, left hemisphere 33.7
1927 Female, age 91, both hemispheres 33.3
2246 Female, age 85, both hemispheres 33.0
2531 Female, age 67, both hemispheres 30.1
Entorhinal gyrus
nTPM: 33.6
2117 Female, age 91, right hemisphere 35.8
2764 Male, age 80, right hemisphere 34.1
1938 Female, age 85, left hemisphere 34.0
2686 Male, age 75, right hemisphere 33.7
1787 Male, age 76, left hemisphere 33.4
2613 Female, age 94, left hemisphere 30.8
Hippocampus, CA1
nTPM: 33.2
2082 Female, age 91, right hemisphere 34.2
2527 Male, age 74, both hemispheres 33.3
1873 Female, age 85, both hemispheres 33.0
2045 Male, age 76, both hemispheres 33.0
2749 Male, age 80, left hemisphere 32.2
Hippocampus, CA2
nTPM: 33.2
2113 Female, age 91, right hemisphere 34.8
2249 Male, age 74, both hemispheres 34.7
1963 Male, age 80, left hemisphere 33.2
2437 Female, age 94, left hemisphere 33.1
1940 Female, age 85, left hemisphere 32.6
1892 Male, age 76, both hemispheres 30.5
Hippocampus, CA3
nTPM: 33.1
1891 Female, age 85, both hemispheres 36.1
2620 Female, age 94, left hemisphere 33.5
2436 Male, age 74, both hemispheres 32.9
2861 Female, age 67, both hemispheres 32.6
1867 Male, age 76, both hemispheres 32.0
2137 Male, age 80, left hemisphere 31.6
Parahippocampal cortex
nTPM: 33.9
1933 Female, age 85, both hemispheres 35.7
1850 Male, age 80, both hemispheres 35.5
2693 Female, age 94, both hemispheres 34.6
2532 Female, age 72, left hemisphere 34.5
2692 Male, age 74, both hemispheres 34.2
2018 Male, age 76, both hemispheres 34.0
1990 Female, age 91, right hemisphere 33.5
2245 Female, age 91, both hemispheres 32.9
2622 Female, age 67, right hemisphere 32.9
2250 Female, age 67, right hemisphere 31.6
Perirhinal gyrus
nTPM: 33.5
1794 Male, age 80, right hemisphere 34.9
2848 Male, age 76, right hemisphere 33.7
1841 Female, age 85, right hemisphere 33.1
2521 Female, age 94, right hemisphere 33.0
1847 Female, age 91, left hemisphere 32.8
Subiculum
nTPM: 34.1
2042 Male, age 76, both hemispheres 36.0
1977 Female, age 85, both hemispheres 35.0
2729 Female, age 91, right hemisphere 34.7
2619 Male, age 74, both hemispheres 34.3
1901 Male, age 80, both hemispheres 33.3
2438 Female, age 94, left hemisphere 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.7
Samples: 197

Max nTPM: 63.1
Min nTPM: 22.7
Std nTPM: 7.2
Median nTPM: 33.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 55.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 54.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 53.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 52.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 51.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 49.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 49.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 48.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 48.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 50.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.8
Sample A Female 9.6
Sample B Female 10.3
Sample C Male 11.1
Sample D Male 8.8
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.6
Sample A Female 11.1
Sample B Female 12.5
Sample C Male 11.9
Sample D Male 10.6
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.8
Sample A Female 12.0
Sample B Female 11.5
Sample C Male 12.2
Sample D Male 10.8
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 10.3
Sample C Male 11.0
Sample D Male 9.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.4
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.0
Sample A Male 15.0
Sample B Male 16.4
Sample C Female 14.0
Sample D Female 20.0
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 13.6
Sample A Male 14.4
Sample B Male 16.6
Sample C Female 17.7
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68924829 Antisense, RP_050309_01_B02, Mouse strain C57BL/6J (56 days, male) 2.2

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