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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.6 nTPM
HPA:33.6 nTPM
GTEx:35.8 nTPM
FANTOM5:54.4 Scaled Tags Per Million
Pig:7.4 nTPM
Mouse:29.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001818Antibody CAB018352
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
1855 Male, age 76, left hemisphere 34.7
1898 Male, age 80, left hemisphere 33.6
1911 Female, age 85, right hemisphere 32.6
2148 Female, age 91, left hemisphere 31.9
2529 Female, age 94, left hemisphere 31.4
2621 Female, age 67, right hemisphere 31.4
Dentate gyrus
nTPM: 32.4
2010 Male, age 76, both hemispheres 35.9
1927 Female, age 91, both hemispheres 32.9
2530 Female, age 94, left hemisphere 32.8
2246 Female, age 85, both hemispheres 32.0
2528 Male, age 74, both hemispheres 30.9
2531 Female, age 67, both hemispheres 30.1
Entorhinal gyrus
nTPM: 31.4
1787 Male, age 76, left hemisphere 33.5
2686 Male, age 75, right hemisphere 33.1
2117 Female, age 91, right hemisphere 31.5
1938 Female, age 85, left hemisphere 31.3
2764 Male, age 80, right hemisphere 29.9
2613 Female, age 94, left hemisphere 29.0
Hippocampus, CA1
nTPM: 33.0
2749 Male, age 80, left hemisphere 35.6
2045 Male, age 76, both hemispheres 35.0
1873 Female, age 85, both hemispheres 32.9
2527 Male, age 74, both hemispheres 32.6
2082 Female, age 91, right hemisphere 29.0
Hippocampus, CA2
nTPM: 32.2
1963 Male, age 80, left hemisphere 33.6
1892 Male, age 76, both hemispheres 33.1
2437 Female, age 94, left hemisphere 32.9
1940 Female, age 85, left hemisphere 32.6
2249 Male, age 74, both hemispheres 31.4
2113 Female, age 91, right hemisphere 29.8
Hippocampus, CA3
nTPM: 33.6
2137 Male, age 80, left hemisphere 36.9
1867 Male, age 76, both hemispheres 35.7
2436 Male, age 74, both hemispheres 33.5
1891 Female, age 85, both hemispheres 32.9
2861 Female, age 67, both hemispheres 32.3
2620 Female, age 94, left hemisphere 30.2
Parahippocampal cortex
nTPM: 31.9
2018 Male, age 76, both hemispheres 36.0
2692 Male, age 74, both hemispheres 33.9
1933 Female, age 85, both hemispheres 32.8
1850 Male, age 80, both hemispheres 32.3
2250 Female, age 67, right hemisphere 31.4
2245 Female, age 91, both hemispheres 31.1
2622 Female, age 67, right hemisphere 31.1
1990 Female, age 91, right hemisphere 30.8
2532 Female, age 72, left hemisphere 30.2
2693 Female, age 94, both hemispheres 29.8
Perirhinal gyrus
nTPM: 31.8
1841 Female, age 85, right hemisphere 33.5
1794 Male, age 80, right hemisphere 33.1
1847 Female, age 91, left hemisphere 32.2
2848 Male, age 76, right hemisphere 31.0
2521 Female, age 94, right hemisphere 28.9
Subiculum
nTPM: 32.3
2042 Male, age 76, both hemispheres 33.8
1901 Male, age 80, both hemispheres 32.8
2619 Male, age 74, both hemispheres 32.4
2729 Female, age 91, right hemisphere 32.3
2438 Female, age 94, left hemisphere 31.7
1977 Female, age 85, both hemispheres 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.8
Samples: 197

Max nTPM: 99.2
Min nTPM: 18.5
Std nTPM: 11.7
Median nTPM: 33.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 99.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 89.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 74.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 71.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 69.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 69.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 67.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 60.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 57.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 55.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 54.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.4
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.5
Sample A Female 7.8
Sample B Female 7.3
Sample C Male 7.7
Sample D Male 5.5
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.0
Sample A Female 6.1
Sample B Female 8.0
Sample C Male 7.7
Sample D Male 5.0
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 7.7
Min nTPM: 7.0
Sample A Female 7.7
Sample B Female 7.1
Sample C Male 7.7
Sample D Male 7.0
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.6
Sample A Female 7.6
Sample B Female 6.7
Sample C Male 8.6
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 36.6
Min nTPM: 24.8
Sample A Male 28.6
Sample B Male 36.6
Sample C Female 29.5
Sample D Female 24.8
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 30.0
Min nTPM: 17.7
Sample A Male 26.1
Sample B Male 30.0
Sample C Female 19.9
Sample D Female 17.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68545971 Antisense, RP_050120_01_G12, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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