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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:23.6 nTPM
HPA:23.6 nTPM
GTEx:39.9 nTPM
FANTOM5:35.4 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:11.8 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044657
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
1911 Female, age 85, right hemisphere 23.4
2529 Female, age 94, left hemisphere 21.1
1898 Male, age 80, left hemisphere 19.9
2621 Female, age 67, right hemisphere 19.2
2148 Female, age 91, left hemisphere 18.9
1855 Male, age 76, left hemisphere 18.1
Dentate gyrus
nTPM: 19.5
2530 Female, age 94, left hemisphere 22.8
2010 Male, age 76, both hemispheres 21.2
2528 Male, age 74, both hemispheres 19.3
2246 Female, age 85, both hemispheres 18.8
1927 Female, age 91, both hemispheres 17.8
2531 Female, age 67, both hemispheres 17.2
Entorhinal gyrus
nTPM: 20.9
2117 Female, age 91, right hemisphere 26.7
2764 Male, age 80, right hemisphere 23.6
2686 Male, age 75, right hemisphere 19.4
1938 Female, age 85, left hemisphere 19.3
1787 Male, age 76, left hemisphere 18.1
2613 Female, age 94, left hemisphere 18.1
Hippocampus, CA1
nTPM: 18.5
2082 Female, age 91, right hemisphere 20.1
1873 Female, age 85, both hemispheres 19.2
2527 Male, age 74, both hemispheres 19.1
2749 Male, age 80, left hemisphere 18.6
2045 Male, age 76, both hemispheres 15.6
Hippocampus, CA2
nTPM: 20.3
2249 Male, age 74, both hemispheres 22.8
1963 Male, age 80, left hemisphere 22.7
2113 Female, age 91, right hemisphere 20.2
1940 Female, age 85, left hemisphere 19.4
2437 Female, age 94, left hemisphere 19.4
1892 Male, age 76, both hemispheres 17.2
Hippocampus, CA3
nTPM: 18.0
1891 Female, age 85, both hemispheres 24.5
1867 Male, age 76, both hemispheres 19.8
2436 Male, age 74, both hemispheres 16.4
2620 Female, age 94, left hemisphere 16.0
2137 Male, age 80, left hemisphere 15.8
2861 Female, age 67, both hemispheres 15.6
Parahippocampal cortex
nTPM: 18.5
2532 Female, age 72, left hemisphere 21.8
2692 Male, age 74, both hemispheres 20.9
1990 Female, age 91, right hemisphere 20.6
2018 Male, age 76, both hemispheres 20.1
1850 Male, age 80, both hemispheres 18.2
1933 Female, age 85, both hemispheres 17.9
2693 Female, age 94, both hemispheres 17.7
2245 Female, age 91, both hemispheres 17.2
2250 Female, age 67, right hemisphere 15.9
2622 Female, age 67, right hemisphere 15.2
Perirhinal gyrus
nTPM: 16.2
1794 Male, age 80, right hemisphere 17.2
2521 Female, age 94, right hemisphere 17.2
2848 Male, age 76, right hemisphere 16.0
1847 Female, age 91, left hemisphere 15.6
1841 Female, age 85, right hemisphere 15.0
Subiculum
nTPM: 23.6
2042 Male, age 76, both hemispheres 31.7
1901 Male, age 80, both hemispheres 26.4
1977 Female, age 85, both hemispheres 23.7
2438 Female, age 94, left hemisphere 20.5
2619 Male, age 74, both hemispheres 19.8
2729 Female, age 91, right hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.9
Samples: 197

Max nTPM: 152.4
Min nTPM: 6.0
Std nTPM: 24.6
Median nTPM: 34.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 152.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 113.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 111.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 110.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 110.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 109.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 104.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 101.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 95.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 88.4
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 86.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.4
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 23.0
Min nTPM: 6.8
Sample A Female 23.0
Sample B Female 11.6
Sample C Male 21.1
Sample D Male 6.8
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.1
Sample A Female 7.6
Sample B Female 8.8
Sample C Male 6.1
Sample D Male 7.0
Subiculum
nTPM: 6.7
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.3
Sample A Female 7.1
Sample B Female 7.1
Sample C Male 5.3
Sample D Male 7.3
Ventral hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 14.2
Min nTPM: 5.3
Sample A Female 11.5
Sample B Female 5.3
Sample C Male 9.2
Sample D Male 14.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.0
Sample A Male 8.4
Sample B Male 6.8
Sample C Female 8.1
Sample D Female 5.0
Hippocampal formation
nTPM: 11.7
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.3
Sample A Male 10.9
Sample B Male 10.3
Sample C Female 14.7
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
70612725 Antisense, RP_050725_01_C03, Mouse strain C57BL/6J (56 days, male) 3.7
513489 Antisense, RP_040810_01_H09, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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