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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:114.4 nTPM
HPA:114.4 nTPM
GTEx:101.3 nTPM
FANTOM5:218.9 Scaled Tags Per Million
Pig:61.8 nTPM
Mouse:154.2 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006702Antibody CAB021101
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.4
Sample id Sample description nTPM
Hippocampus
nTPM: 103.9
1855 Male, age 76, left hemisphere 119.6
1898 Male, age 80, left hemisphere 116.1
2621 Female, age 67, right hemisphere 105.9
2529 Female, age 94, left hemisphere 94.9
1911 Female, age 85, right hemisphere 93.5
2148 Female, age 91, left hemisphere 93.5
Dentate gyrus
nTPM: 107.3
2010 Male, age 76, both hemispheres 117.9
2530 Female, age 94, left hemisphere 113.9
1927 Female, age 91, both hemispheres 108.4
2246 Female, age 85, both hemispheres 103.7
2528 Male, age 74, both hemispheres 100.9
2531 Female, age 67, both hemispheres 98.9
Entorhinal gyrus
nTPM: 102.9
2764 Male, age 80, right hemisphere 112.8
2613 Female, age 94, left hemisphere 107.5
1938 Female, age 85, left hemisphere 106.6
1787 Male, age 76, left hemisphere 104.3
2117 Female, age 91, right hemisphere 97.0
2686 Male, age 75, right hemisphere 88.9
Hippocampus, CA1
nTPM: 110.7
2749 Male, age 80, left hemisphere 136.7
2045 Male, age 76, both hemispheres 108.0
1873 Female, age 85, both hemispheres 107.7
2527 Male, age 74, both hemispheres 103.2
2082 Female, age 91, right hemisphere 97.9
Hippocampus, CA2
nTPM: 106.5
1963 Male, age 80, left hemisphere 116.4
1892 Male, age 76, both hemispheres 114.4
2249 Male, age 74, both hemispheres 105.9
2437 Female, age 94, left hemisphere 104.5
1940 Female, age 85, left hemisphere 100.1
2113 Female, age 91, right hemisphere 97.8
Hippocampus, CA3
nTPM: 106.6
2137 Male, age 80, left hemisphere 117.8
2620 Female, age 94, left hemisphere 111.1
1867 Male, age 76, both hemispheres 109.5
2436 Male, age 74, both hemispheres 108.4
1891 Female, age 85, both hemispheres 98.5
2861 Female, age 67, both hemispheres 94.0
Parahippocampal cortex
nTPM: 101.8
1850 Male, age 80, both hemispheres 112.3
2250 Female, age 67, right hemisphere 107.3
2018 Male, age 76, both hemispheres 106.4
1933 Female, age 85, both hemispheres 106.1
2532 Female, age 72, left hemisphere 103.0
2245 Female, age 91, both hemispheres 100.8
1990 Female, age 91, right hemisphere 100.5
2693 Female, age 94, both hemispheres 100.0
2692 Male, age 74, both hemispheres 93.4
2622 Female, age 67, right hemisphere 87.8
Perirhinal gyrus
nTPM: 114.4
1847 Female, age 91, left hemisphere 123.6
1794 Male, age 80, right hemisphere 122.9
2521 Female, age 94, right hemisphere 114.3
1841 Female, age 85, right hemisphere 108.0
2848 Male, age 76, right hemisphere 103.5
Subiculum
nTPM: 101.1
1977 Female, age 85, both hemispheres 108.8
1901 Male, age 80, both hemispheres 105.2
2438 Female, age 94, left hemisphere 103.4
2729 Female, age 91, right hemisphere 97.1
2619 Male, age 74, both hemispheres 96.1
2042 Male, age 76, both hemispheres 96.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.3
Samples: 197

Max nTPM: 192.5
Min nTPM: 58.2
Std nTPM: 27.3
Median nTPM: 95.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 192.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 186.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 181.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 174.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 164.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 159.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 159.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 158.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 151.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 151.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 150.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 218.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 218.9
FF:10169-103B7 60 years, female 291.9
FF:10153-102I9 76 years, female 146.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.8
Samples: 4

Max nTPM: 83.6
Min nTPM: 49.2
Sample A Female 83.6
Sample B Female 59.6
Sample C Male 54.8
Sample D Male 49.2
Entorhinal cortex
nTPM: 51.6
Samples: 4

Max nTPM: 60.3
Min nTPM: 41.6
Sample A Female 56.8
Sample B Female 60.3
Sample C Male 47.8
Sample D Male 41.6
Subiculum
nTPM: 49.3
Samples: 4

Max nTPM: 65.6
Min nTPM: 40.5
Sample A Female 65.6
Sample B Female 46.2
Sample C Male 40.5
Sample D Male 44.8
Ventral hippocampus
nTPM: 55.1
Samples: 4

Max nTPM: 64.4
Min nTPM: 38.0
Sample A Female 64.4
Sample B Female 38.0
Sample C Male 60.4
Sample D Male 57.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 154.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 151.2
Samples: 4

Max nTPM: 161.7
Min nTPM: 138.6
Sample A Male 138.6
Sample B Male 152.9
Sample C Female 161.7
Sample D Female 151.4
Hippocampal formation
nTPM: 154.2
Samples: 4

Max nTPM: 172.3
Min nTPM: 139.5
Sample A Male 172.3
Sample B Male 139.5
Sample C Female 157.4
Sample D Female 147.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
393265 Antisense, RP_040809_01_B07, Mouse strain C57BL/6J (56 days, male) 10.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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