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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:165.1 nTPM
HPA:165.1 nTPM
GTEx:261.0 nTPM
FANTOM5:131.7 Scaled Tags Per Million
Pig:115.2 nTPM
Mouse:124.3 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041713Antibody HPA049578
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 165.1
Sample id Sample description nTPM
Hippocampus
nTPM: 165.1
2621 Female, age 67, right hemisphere 196.8
2529 Female, age 94, left hemisphere 185.8
1911 Female, age 85, right hemisphere 167.3
2148 Female, age 91, left hemisphere 159.4
1898 Male, age 80, left hemisphere 142.2
1855 Male, age 76, left hemisphere 139.1
Dentate gyrus
nTPM: 146.0
2531 Female, age 67, both hemispheres 202.3
1927 Female, age 91, both hemispheres 149.9
2528 Male, age 74, both hemispheres 137.9
2530 Female, age 94, left hemisphere 134.7
2246 Female, age 85, both hemispheres 129.1
2010 Male, age 76, both hemispheres 121.9
Entorhinal gyrus
nTPM: 144.9
2686 Male, age 75, right hemisphere 160.8
2613 Female, age 94, left hemisphere 155.6
2764 Male, age 80, right hemisphere 147.5
1787 Male, age 76, left hemisphere 142.0
1938 Female, age 85, left hemisphere 136.0
2117 Female, age 91, right hemisphere 127.5
Hippocampus, CA1
nTPM: 139.7
2527 Male, age 74, both hemispheres 159.1
1873 Female, age 85, both hemispheres 145.4
2749 Male, age 80, left hemisphere 145.4
2082 Female, age 91, right hemisphere 124.7
2045 Male, age 76, both hemispheres 123.7
Hippocampus, CA2
nTPM: 135.9
1963 Male, age 80, left hemisphere 174.4
2113 Female, age 91, right hemisphere 141.9
2437 Female, age 94, left hemisphere 132.5
1892 Male, age 76, both hemispheres 122.9
1940 Female, age 85, left hemisphere 122.1
2249 Male, age 74, both hemispheres 121.3
Hippocampus, CA3
nTPM: 164.7
2861 Female, age 67, both hemispheres 230.3
2620 Female, age 94, left hemisphere 201.3
2137 Male, age 80, left hemisphere 177.1
1867 Male, age 76, both hemispheres 137.0
1891 Female, age 85, both hemispheres 130.4
2436 Male, age 74, both hemispheres 111.9
Parahippocampal cortex
nTPM: 142.9
2622 Female, age 67, right hemisphere 175.2
2245 Female, age 91, both hemispheres 174.1
2532 Female, age 72, left hemisphere 146.0
1933 Female, age 85, both hemispheres 141.0
2250 Female, age 67, right hemisphere 138.4
2692 Male, age 74, both hemispheres 137.7
2018 Male, age 76, both hemispheres 133.6
2693 Female, age 94, both hemispheres 133.5
1850 Male, age 80, both hemispheres 125.9
1990 Female, age 91, right hemisphere 124.1
Perirhinal gyrus
nTPM: 140.5
1794 Male, age 80, right hemisphere 150.6
2521 Female, age 94, right hemisphere 143.5
1847 Female, age 91, left hemisphere 140.0
1841 Female, age 85, right hemisphere 137.4
2848 Male, age 76, right hemisphere 130.7
Subiculum
nTPM: 127.8
2619 Male, age 74, both hemispheres 146.3
2729 Female, age 91, right hemisphere 135.7
1901 Male, age 80, both hemispheres 125.8
2042 Male, age 76, both hemispheres 125.3
1977 Female, age 85, both hemispheres 125.0
2438 Female, age 94, left hemisphere 108.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 261.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 261.0
Samples: 197

Max nTPM: 823.6
Min nTPM: 52.5
Std nTPM: 128.9
Median nTPM: 247.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 823.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 747.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 698.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 676.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 608.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 560.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 554.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 551.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 490.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 489.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 487.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.7
FF:10153-102I9 76 years, female 168.2
FF:10169-103B7 60 years, female 95.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.5
Samples: 4

Max nTPM: 89.9
Min nTPM: 65.3
Sample A Female 89.9
Sample B Female 86.0
Sample C Male 65.3
Sample D Male 68.7
Entorhinal cortex
nTPM: 115.2
Samples: 4

Max nTPM: 153.1
Min nTPM: 91.7
Sample A Female 119.1
Sample B Female 91.7
Sample C Male 153.1
Sample D Male 97.0
Subiculum
nTPM: 90.0
Samples: 4

Max nTPM: 124.6
Min nTPM: 69.8
Sample A Female 124.6
Sample B Female 79.3
Sample C Male 86.1
Sample D Male 69.8
Ventral hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 101.3
Min nTPM: 54.9
Sample A Female 54.9
Sample B Female 61.3
Sample C Male 101.3
Sample D Male 95.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.3
Samples: 4

Max nTPM: 131.1
Min nTPM: 118.0
Sample A Male 131.1
Sample B Male 122.9
Sample C Female 118.0
Sample D Female 125.2
Hippocampal formation
nTPM: 98.5
Samples: 4

Max nTPM: 112.2
Min nTPM: 79.1
Sample A Male 109.3
Sample B Male 93.4
Sample C Female 79.1
Sample D Female 112.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
69059956 Antisense, RP_050317_04_G04, Mouse strain C57BL/6J (56 days, male) 10.1

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