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SNRPD3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.9 nTPM
HPA:23.9 nTPM
GTEx:23.2 nTPM
FANTOM5:102.6 Scaled Tags Per Million

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 23.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 22.5
2411 Female, age 72, unknown 24.3
1870 Female, age 42, unknown 24.2
2219 Male, age 76, both hemispheres 23.7
1833 Male, age 53, unknown 23.6
1830 Male, age 51, unknown 22.9
1827 Male, age 72, unknown 22.1
2019 Male, age 18, unknown 22.0
2828 Female, age 72, unknown 21.7
2666 Male, age 74, left hemisphere 20.4
2586 Male, age 75, left hemisphere 20.1
Dorsal raphe nucleus
nTPM: 20.9
2750 Male, age 76, both hemispheres 26.1
1828 Male, age 53, unknown 20.4
2047 Male, age 72, unknown 19.7
2298 Female, age 72, unknown 19.2
2016 Female, age 72, unknown 19.0
Inferior colliculus
nTPM: 21.1
2097 Female, age 72, unknown 22.0
2849 Male, age 72, unknown 21.2
1848 Female, age 42, unknown 21.1
1890 Male, age 53, unknown 20.2
Median raphe nucleus
nTPM: 23.8
2220 Male, age 76, midline 23.8
Pedunculopontine tegmental nucleus
nTPM: 23.2
2334 Male, age 80, both hemispheres 25.2
1921 Female, age 85, both hemispheres 22.9
2338 Male, age 61, both hemispheres 21.6
Periaquaductal grey, anterior
nTPM: 22.5
2502 Female, age 75, unknown 25.0
1947 Male, age 18, unknown 22.3
1795 Male, age 51, unknown 20.1
Periaquaductal grey, dorsal
nTPM: 21.9
1840 Male, age 53, unknown 22.2
2850 Male, age 76, both hemispheres 22.2
2464 Female, age 72, unknown 21.9
1831 Male, age 72, unknown 21.4
Periaquaductal grey, lateral
nTPM: 20.8
2140 Male, age 76, both hemispheres 21.5
2053 Male, age 18, unknown 21.4
2272 Male, age 74, both hemispheres 19.4
Pretectal area
nTPM: 22.5
1817 Female, age 42, unknown 24.4
1944 Female, age 72, unknown 23.9
1815 Male, age 53, unknown 23.8
2316 Male, age 76, right hemisphere 22.9
1816 Male, age 51, unknown 22.8
2825 Male, age 18, unknown 22.0
2224 Female, age 72, unknown 21.9
2007 Male, age 72, unknown 21.7
2407 Male, age 75, both hemispheres 21.5
2273 Male, age 74, both hemispheres 21.3
2667 Female, age 75, unknown 21.2
Red nucleus
nTPM: 23.9
1865 Male, age 51, unknown 26.3
1821 Female, age 72, unknown 24.8
1954 Female, age 42, unknown 24.3
2769 Male, age 72, unknown 24.3
2227 Male, age 72, unknown 24.2
1904 Male, age 53, unknown 24.1
2588 Male, age 74, left hemisphere 24.1
2503 Female, age 72, unknown 23.6
2823 Male, age 76, right hemisphere 23.4
2725 Female, age 75, unknown 23.2
2584 Male, age 75, left hemisphere 22.4
2785 Male, age 18, unknown 22.3
Substantia nigra
nTPM: 21.7
2241 Male, age 72, unknown 25.1
1889 Female, age 72, unknown 24.4
1851 Male, age 51, unknown 23.1
2699 Male, age 18, unknown 21.6
2590 Female, age 75, unknown 21.5
1916 Female, age 42, unknown 21.0
1941 Male, age 53, unknown 20.7
2409 Female, age 72, unknown 20.4
2583 Male, age 75, right hemisphere 20.0
2665 Male, age 74, both hemispheres 19.3
Superior colliculus
nTPM: 21.9
1895 Male, age 76, right hemisphere 24.0
2261 Male, age 18, unknown 23.8
2587 Male, age 74, left hemisphere 22.8
1913 Female, age 42, unknown 22.3
1796 Male, age 53, unknown 22.1
1839 Male, age 51, unknown 22.1
2668 Female, age 75, unknown 21.5
2087 Female, age 72, unknown 20.8
1995 Male, age 72, unknown 20.7
2664 Male, age 75, both hemispheres 18.8
Ventral tegmental area
nTPM: 23.2
2218 Male, age 76, both hemispheres 25.3
2223 Female, age 72, unknown 24.7
2410 Female, age 72, unknown 24.1
2021 Male, age 53, unknown 22.3
1915 Female, age 42, unknown 22.0
1942 Male, age 51, unknown 20.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 23.2
Samples: 139

Max nTPM: 40.4
Min nTPM: 14.8
Std nTPM: 4.5
Median nTPM: 22.0
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 40.4
GTEX-NL4W-0011-R2a-SM-2I5GV 50-59 years, male 35.1
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 35.0
GTEX-1399T-0011-R2b-SM-5DUXM 60-69 years, male 34.1
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 33.1
GTEX-WHSE-0011-R2A-SM-3P5ZL 20-29 years, male 32.1
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 31.5
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 31.3
GTEX-1GTWX-0011-R2b-SM-ADEH5 60-69 years, male 30.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 30.6
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 30.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 102.6
FF:10158-103A5 76 years, female 102.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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