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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:6.5 nTPM
HPA:6.5 nTPM
GTEx:35.7 nTPM
FANTOM5:70.1 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020361
Glial cells Low
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.5
Sample id Sample description nTPM
Hippocampus
nTPM: 4.7
2148 Female, age 91, left hemisphere 9.6
1898 Male, age 80, left hemisphere 4.8
1855 Male, age 76, left hemisphere 4.5
1911 Female, age 85, right hemisphere 4.0
2529 Female, age 94, left hemisphere 3.6
2621 Female, age 67, right hemisphere 1.5
Dentate gyrus
nTPM: 4.0
2528 Male, age 74, both hemispheres 6.3
2246 Female, age 85, both hemispheres 5.9
1927 Female, age 91, both hemispheres 5.2
2530 Female, age 94, left hemisphere 2.4
2531 Female, age 67, both hemispheres 2.2
2010 Male, age 76, both hemispheres 2.0
Entorhinal gyrus
nTPM: 3.5
2686 Male, age 75, right hemisphere 6.8
2764 Male, age 80, right hemisphere 4.7
2117 Female, age 91, right hemisphere 3.9
1787 Male, age 76, left hemisphere 3.8
1938 Female, age 85, left hemisphere 2.0
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 4.2
2527 Male, age 74, both hemispheres 8.3
1873 Female, age 85, both hemispheres 7.1
2082 Female, age 91, right hemisphere 4.2
2749 Male, age 80, left hemisphere 0.8
2045 Male, age 76, both hemispheres 0.4
Hippocampus, CA2
nTPM: 4.7
2113 Female, age 91, right hemisphere 7.7
2249 Male, age 74, both hemispheres 6.7
1940 Female, age 85, left hemisphere 6.0
1963 Male, age 80, left hemisphere 4.4
2437 Female, age 94, left hemisphere 3.5
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 6.0
2436 Male, age 74, both hemispheres 19.7
2861 Female, age 67, both hemispheres 5.6
1891 Female, age 85, both hemispheres 5.5
2620 Female, age 94, left hemisphere 4.5
2137 Male, age 80, left hemisphere 0.3
1867 Male, age 76, both hemispheres 0.0
Parahippocampal cortex
nTPM: 3.4
2692 Male, age 74, both hemispheres 8.4
1990 Female, age 91, right hemisphere 6.0
2622 Female, age 67, right hemisphere 4.8
1933 Female, age 85, both hemispheres 3.0
2250 Female, age 67, right hemisphere 2.9
2018 Male, age 76, both hemispheres 2.6
2245 Female, age 91, both hemispheres 2.4
1850 Male, age 80, both hemispheres 2.3
2693 Female, age 94, both hemispheres 1.4
2532 Female, age 72, left hemisphere 0.4
Perirhinal gyrus
nTPM: 1.7
1794 Male, age 80, right hemisphere 3.2
2521 Female, age 94, right hemisphere 2.0
1847 Female, age 91, left hemisphere 1.9
2848 Male, age 76, right hemisphere 1.1
1841 Female, age 85, right hemisphere 0.5
Subiculum
nTPM: 6.5
2729 Female, age 91, right hemisphere 11.5
2619 Male, age 74, both hemispheres 9.8
2438 Female, age 94, left hemisphere 9.1
1977 Female, age 85, both hemispheres 3.2
1901 Male, age 80, both hemispheres 3.0
2042 Male, age 76, both hemispheres 2.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 108.9
Min nTPM: 1.8
Std nTPM: 18.0
Median nTPM: 31.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 108.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 96.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 95.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 93.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 71.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 70.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 69.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 69.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 65.9
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 65.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.1
FF:10153-102I9 76 years, female 95.2
FF:10169-103B7 60 years, female 44.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.