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SLC25A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.5 nTPM
HPA:41.5 nTPM
GTEx:34.2 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:26.4 nTPM
Mouse:29.6 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
1898 Male, age 80, left hemisphere 42.4
2529 Female, age 94, left hemisphere 42.4
2148 Female, age 91, left hemisphere 41.1
1911 Female, age 85, right hemisphere 40.5
1855 Male, age 76, left hemisphere 39.6
2621 Female, age 67, right hemisphere 38.4
Dentate gyrus
nTPM: 41.1
2528 Male, age 74, both hemispheres 44.3
2530 Female, age 94, left hemisphere 42.9
2010 Male, age 76, both hemispheres 42.0
2246 Female, age 85, both hemispheres 42.0
2531 Female, age 67, both hemispheres 39.1
1927 Female, age 91, both hemispheres 36.5
Entorhinal gyrus
nTPM: 41.5
2117 Female, age 91, right hemisphere 47.7
1787 Male, age 76, left hemisphere 41.3
2764 Male, age 80, right hemisphere 40.6
1938 Female, age 85, left hemisphere 40.3
2686 Male, age 75, right hemisphere 40.3
2613 Female, age 94, left hemisphere 39.1
Hippocampus, CA1
nTPM: 40.4
2082 Female, age 91, right hemisphere 42.0
2527 Male, age 74, both hemispheres 41.9
2749 Male, age 80, left hemisphere 40.2
1873 Female, age 85, both hemispheres 40.1
2045 Male, age 76, both hemispheres 38.1
Hippocampus, CA2
nTPM: 40.7
2249 Male, age 74, both hemispheres 44.0
1963 Male, age 80, left hemisphere 42.7
2437 Female, age 94, left hemisphere 41.5
2113 Female, age 91, right hemisphere 41.3
1940 Female, age 85, left hemisphere 38.1
1892 Male, age 76, both hemispheres 36.9
Hippocampus, CA3
nTPM: 40.6
2436 Male, age 74, both hemispheres 44.6
2861 Female, age 67, both hemispheres 41.7
1891 Female, age 85, both hemispheres 40.7
2620 Female, age 94, left hemisphere 39.9
1867 Male, age 76, both hemispheres 39.1
2137 Male, age 80, left hemisphere 37.5
Parahippocampal cortex
nTPM: 40.1
2692 Male, age 74, both hemispheres 42.5
2250 Female, age 67, right hemisphere 42.0
2245 Female, age 91, both hemispheres 40.4
2622 Female, age 67, right hemisphere 40.4
1990 Female, age 91, right hemisphere 40.2
1933 Female, age 85, both hemispheres 40.0
2532 Female, age 72, left hemisphere 39.2
2018 Male, age 76, both hemispheres 39.0
1850 Male, age 80, both hemispheres 38.9
2693 Female, age 94, both hemispheres 38.5
Perirhinal gyrus
nTPM: 38.3
1847 Female, age 91, left hemisphere 39.8
1794 Male, age 80, right hemisphere 39.0
2521 Female, age 94, right hemisphere 38.5
1841 Female, age 85, right hemisphere 37.8
2848 Male, age 76, right hemisphere 36.3
Subiculum
nTPM: 41.0
2619 Male, age 74, both hemispheres 42.8
2729 Female, age 91, right hemisphere 42.7
1977 Female, age 85, both hemispheres 41.9
2042 Male, age 76, both hemispheres 41.7
1901 Male, age 80, both hemispheres 39.9
2438 Female, age 94, left hemisphere 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.2
Samples: 197

Max nTPM: 88.4
Min nTPM: 17.2
Std nTPM: 9.2
Median nTPM: 32.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 88.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 59.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 59.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 57.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 53.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 52.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 51.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 51.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 50.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.5
FF:10153-102I9 76 years, female 38.9
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 30.9
Min nTPM: 18.4
Sample A Female 30.9
Sample B Female 21.2
Sample C Male 27.2
Sample D Male 18.4
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 25.2
Min nTPM: 17.4
Sample A Female 20.8
Sample B Female 23.2
Sample C Male 25.2
Sample D Male 17.4
Subiculum
nTPM: 24.9
Samples: 4

Max nTPM: 30.2
Min nTPM: 22.5
Sample A Female 30.2
Sample B Female 22.8
Sample C Male 24.1
Sample D Male 22.5
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 36.2
Min nTPM: 20.0
Sample A Female 26.4
Sample B Female 20.0
Sample C Male 36.2
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.7
Min nTPM: 24.5
Sample A Male 24.7
Sample B Male 24.5
Sample C Female 27.5
Sample D Female 29.7
Hippocampal formation
nTPM: 29.6
Samples: 4

Max nTPM: 34.5
Min nTPM: 26.6
Sample A Male 30.0
Sample B Male 26.6
Sample C Female 27.4
Sample D Female 34.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
77454675 Antisense, RP_070129_01_C07, Mouse strain C57BL/6J (56 days, male) 1.2
2587 Antisense, RP_040507_01_F10, Mouse strain C57BL/6J (56 days, male) 0.9

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