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EIF3L
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.8 nTPM
HPA:22.8 nTPM
GTEx:44.2 nTPM
FANTOM5:169.3 Scaled Tags Per Million
Pig:46.0 nTPM
Mouse:58.8 nTPM
Allen mouse:5.7 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 21.7
2019 Male, age 18, unknown 23.8
1833 Male, age 53, unknown 22.9
2666 Male, age 74, left hemisphere 22.0
1830 Male, age 51, unknown 21.8
2219 Male, age 76, both hemispheres 21.6
2411 Female, age 72, unknown 21.5
2828 Female, age 72, unknown 21.4
2586 Male, age 75, left hemisphere 21.3
1870 Female, age 42, unknown 20.8
1827 Male, age 72, unknown 20.3
Dorsal raphe nucleus
nTPM: 21.4
1828 Male, age 53, unknown 21.9
2016 Female, age 72, unknown 21.6
2298 Female, age 72, unknown 21.4
2750 Male, age 76, both hemispheres 21.4
2047 Male, age 72, unknown 20.7
Inferior colliculus
nTPM: 20.3
1890 Male, age 53, unknown 21.0
2097 Female, age 72, unknown 21.0
1848 Female, age 42, unknown 20.6
2849 Male, age 72, unknown 18.6
Median raphe nucleus
nTPM: 22.0
2220 Male, age 76, midline 22.0
Pedunculopontine tegmental nucleus
nTPM: 22.1
1921 Female, age 85, both hemispheres 22.6
2334 Male, age 80, both hemispheres 22.1
2338 Male, age 61, both hemispheres 21.7
Periaquaductal grey, anterior
nTPM: 22.1
1947 Male, age 18, unknown 22.4
2502 Female, age 75, unknown 22.1
1795 Male, age 51, unknown 21.7
Periaquaductal grey, dorsal
nTPM: 21.4
2464 Female, age 72, unknown 22.8
1831 Male, age 72, unknown 21.1
1840 Male, age 53, unknown 21.1
2850 Male, age 76, both hemispheres 20.7
Periaquaductal grey, lateral
nTPM: 22.0
2053 Male, age 18, unknown 22.3
2272 Male, age 74, both hemispheres 22.3
2140 Male, age 76, both hemispheres 21.5
Pretectal area
nTPM: 21.7
2316 Male, age 76, right hemisphere 22.9
2224 Female, age 72, unknown 22.2
2273 Male, age 74, both hemispheres 22.0
2407 Male, age 75, both hemispheres 22.0
2667 Female, age 75, unknown 21.9
2825 Male, age 18, unknown 21.8
1816 Male, age 51, unknown 21.6
2007 Male, age 72, unknown 21.3
1944 Female, age 72, unknown 21.0
1817 Female, age 42, unknown 20.9
1815 Male, age 53, unknown 20.7
Red nucleus
nTPM: 21.4
2588 Male, age 74, left hemisphere 22.8
2227 Male, age 72, unknown 22.5
2584 Male, age 75, left hemisphere 22.3
1821 Female, age 72, unknown 21.9
1865 Male, age 51, unknown 21.6
1954 Female, age 42, unknown 21.3
2503 Female, age 72, unknown 21.3
2823 Male, age 76, right hemisphere 21.3
2725 Female, age 75, unknown 20.9
2769 Male, age 72, unknown 20.5
1904 Male, age 53, unknown 20.4
2785 Male, age 18, unknown 19.6
Substantia nigra
nTPM: 22.8
2241 Male, age 72, unknown 35.0
2590 Female, age 75, unknown 22.4
1851 Male, age 51, unknown 22.3
1889 Female, age 72, unknown 22.1
1941 Male, age 53, unknown 21.7
1916 Female, age 42, unknown 21.6
2583 Male, age 75, right hemisphere 21.2
2665 Male, age 74, both hemispheres 21.2
2699 Male, age 18, unknown 20.8
2409 Female, age 72, unknown 19.2
Superior colliculus
nTPM: 21.6
1895 Male, age 76, right hemisphere 23.2
2664 Male, age 75, both hemispheres 22.7
2261 Male, age 18, unknown 22.3
1913 Female, age 42, unknown 22.0
1839 Male, age 51, unknown 21.5
2587 Male, age 74, left hemisphere 21.5
2668 Female, age 75, unknown 21.5
1796 Male, age 53, unknown 21.3
2087 Female, age 72, unknown 20.6
1995 Male, age 72, unknown 19.6
Ventral tegmental area
nTPM: 21.4
2218 Male, age 76, both hemispheres 22.5
2021 Male, age 53, unknown 21.9
1942 Male, age 51, unknown 21.4
2223 Female, age 72, unknown 21.2
2410 Female, age 72, unknown 21.2
1915 Female, age 42, unknown 20.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 44.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 44.2
Samples: 139

Max nTPM: 102.3
Min nTPM: 10.6
Std nTPM: 18.9
Median nTPM: 40.1
GTEX-R55E-0011-R2A-SM-EYYV9 20-29 years, male 102.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 101.8
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 100.1
GTEX-1GN2E-0011-R2a-SM-9WG7D 60-69 years, male 93.6
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 92.7
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 87.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 82.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 80.9
GTEX-1HR98-0011-R2a-SM-ARL7A 60-69 years, male 78.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ 60-69 years, male 76.7
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 74.8
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 169.3
FF:10158-103A5 76 years, female 169.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 46.0
Pig sample Sample description nTPM
Midbrain
nTPM: 46.0
Samples: 4

Max nTPM: 66.7
Min nTPM: 35.8
Sample A Female 66.7
Sample B Female 41.1
Sample C Male 40.2
Sample D Male 35.8
Periaqueductal gray
nTPM: 37.7
Samples: 3

Max nTPM: 40.6
Min nTPM: 34.2
Sample B Female 38.2
Sample C Male 40.6
Sample D Male 34.2
Substantia nigra
nTPM: 44.4
Samples: 4

Max nTPM: 51.8
Min nTPM: 41.6
Sample A Female 51.8
Sample B Female 42.2
Sample C Male 41.8
Sample D Male 41.6
Superior colliculi
nTPM: 45.5
Samples: 4

Max nTPM: 53.8
Min nTPM: 40.8
Sample A Female 53.8
Sample B Female 46.2
Sample C Male 41.0
Sample D Male 40.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 58.8
Mouse sample Sample description nTPM
Midbrain
nTPM: 58.8
Samples: 4

Max nTPM: 61.0
Min nTPM: 57.4
Sample A Male 61.0
Sample B Male 58.5
Sample C Female 58.3
Sample D Female 57.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.7
69174022 Antisense, RP_050329_01_G08, Mouse strain C57BL/6J (56 days, male) 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.