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SOX10
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:82.7 nTPM
HPA:82.7 nTPM
GTEx:85.2 nTPM
FANTOM5:142.7 Scaled Tags Per Million
Pig:51.8 nTPM
Mouse:25.0 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068898Antibody CAB003171
Glial cells HighHigh
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.7
Sample id Sample description nTPM
Hippocampus
nTPM: 61.1
2529 Female, age 94, left hemisphere 71.7
1911 Female, age 85, right hemisphere 68.6
2621 Female, age 67, right hemisphere 65.6
2148 Female, age 91, left hemisphere 55.7
1855 Male, age 76, left hemisphere 52.8
1898 Male, age 80, left hemisphere 52.4
Dentate gyrus
nTPM: 59.1
2530 Female, age 94, left hemisphere 80.1
2010 Male, age 76, both hemispheres 62.6
2528 Male, age 74, both hemispheres 58.7
2246 Female, age 85, both hemispheres 56.5
2531 Female, age 67, both hemispheres 51.9
1927 Female, age 91, both hemispheres 44.7
Entorhinal gyrus
nTPM: 70.1
2117 Female, age 91, right hemisphere 96.2
2764 Male, age 80, right hemisphere 78.2
2613 Female, age 94, left hemisphere 68.3
2686 Male, age 75, right hemisphere 60.5
1787 Male, age 76, left hemisphere 59.6
1938 Female, age 85, left hemisphere 57.7
Hippocampus, CA1
nTPM: 50.3
2527 Male, age 74, both hemispheres 60.2
2082 Female, age 91, right hemisphere 57.8
1873 Female, age 85, both hemispheres 53.7
2749 Male, age 80, left hemisphere 44.9
2045 Male, age 76, both hemispheres 34.8
Hippocampus, CA2
nTPM: 60.0
2437 Female, age 94, left hemisphere 69.9
1963 Male, age 80, left hemisphere 64.4
2249 Male, age 74, both hemispheres 63.4
2113 Female, age 91, right hemisphere 63.1
1940 Female, age 85, left hemisphere 56.8
1892 Male, age 76, both hemispheres 42.3
Hippocampus, CA3
nTPM: 51.1
1891 Female, age 85, both hemispheres 78.0
1867 Male, age 76, both hemispheres 58.1
2436 Male, age 74, both hemispheres 48.0
2620 Female, age 94, left hemisphere 44.3
2861 Female, age 67, both hemispheres 40.4
2137 Male, age 80, left hemisphere 37.7
Parahippocampal cortex
nTPM: 59.9
2692 Male, age 74, both hemispheres 81.0
2532 Female, age 72, left hemisphere 73.3
1990 Female, age 91, right hemisphere 67.1
2018 Male, age 76, both hemispheres 59.8
2245 Female, age 91, both hemispheres 59.4
1850 Male, age 80, both hemispheres 56.3
1933 Female, age 85, both hemispheres 53.8
2693 Female, age 94, both hemispheres 53.3
2250 Female, age 67, right hemisphere 48.5
2622 Female, age 67, right hemisphere 46.4
Perirhinal gyrus
nTPM: 44.9
2521 Female, age 94, right hemisphere 48.6
2848 Male, age 76, right hemisphere 45.5
1794 Male, age 80, right hemisphere 45.1
1847 Female, age 91, left hemisphere 44.4
1841 Female, age 85, right hemisphere 40.7
Subiculum
nTPM: 82.7
2042 Male, age 76, both hemispheres 113.6
1901 Male, age 80, both hemispheres 89.4
2438 Female, age 94, left hemisphere 87.5
2619 Male, age 74, both hemispheres 76.0
1977 Female, age 85, both hemispheres 73.7
2729 Female, age 91, right hemisphere 56.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.2
Samples: 197

Max nTPM: 322.9
Min nTPM: 18.9
Std nTPM: 49.3
Median nTPM: 74.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 322.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 257.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 238.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 237.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 210.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 192.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 191.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 190.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 179.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 176.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 172.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.7
FF:10153-102I9 76 years, female 214.4
FF:10169-103B7 60 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.9
Samples: 4

Max nTPM: 82.5
Min nTPM: 18.2
Sample A Female 82.5
Sample B Female 33.2
Sample C Male 73.5
Sample D Male 18.2
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 23.3
Min nTPM: 21.0
Sample A Female 21.0
Sample B Female 23.3
Sample C Male 22.1
Sample D Male 22.8
Subiculum
nTPM: 29.6
Samples: 4

Max nTPM: 38.8
Min nTPM: 24.2
Sample A Female 38.8
Sample B Female 30.0
Sample C Male 25.4
Sample D Male 24.2
Ventral hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 46.5
Min nTPM: 21.1
Sample A Female 46.5
Sample B Female 21.1
Sample C Male 45.5
Sample D Male 45.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 20.9
Min nTPM: 12.5
Sample A Male 20.9
Sample B Male 17.5
Sample C Female 16.0
Sample D Female 12.5
Hippocampal formation
nTPM: 25.1
Samples: 4

Max nTPM: 31.0
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 24.7
Sample C Female 31.0
Sample D Female 26.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
79556652 Antisense, RP_071204_01_A09, Mouse strain C57BL/6J (56 days, male) 3.2
75694718 Antisense, RP_060518_03_H03, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.