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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:50.2 nTPM
HPA:50.2 nTPM
GTEx:33.5 nTPM
FANTOM5:88.9 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:38.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018419Antibody HPA048790
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.2
Sample id Sample description nTPM
Hippocampus
nTPM: 49.3
2529 Female, age 94, left hemisphere 51.8
2148 Female, age 91, left hemisphere 50.0
2621 Female, age 67, right hemisphere 48.8
1911 Female, age 85, right hemisphere 48.7
1898 Male, age 80, left hemisphere 48.4
1855 Male, age 76, left hemisphere 48.3
Dentate gyrus
nTPM: 49.7
2528 Male, age 74, both hemispheres 51.1
2530 Female, age 94, left hemisphere 50.4
2010 Male, age 76, both hemispheres 50.3
2531 Female, age 67, both hemispheres 49.6
2246 Female, age 85, both hemispheres 48.7
1927 Female, age 91, both hemispheres 47.8
Entorhinal gyrus
nTPM: 49.6
2117 Female, age 91, right hemisphere 51.9
2686 Male, age 75, right hemisphere 51.0
1787 Male, age 76, left hemisphere 50.4
2764 Male, age 80, right hemisphere 49.5
1938 Female, age 85, left hemisphere 47.9
2613 Female, age 94, left hemisphere 47.1
Hippocampus, CA1
nTPM: 48.9
2527 Male, age 74, both hemispheres 49.2
2045 Male, age 76, both hemispheres 49.0
2082 Female, age 91, right hemisphere 49.0
1873 Female, age 85, both hemispheres 48.9
2749 Male, age 80, left hemisphere 48.5
Hippocampus, CA2
nTPM: 48.9
1963 Male, age 80, left hemisphere 50.5
2437 Female, age 94, left hemisphere 49.3
2113 Female, age 91, right hemisphere 49.2
2249 Male, age 74, both hemispheres 48.9
1940 Female, age 85, left hemisphere 48.3
1892 Male, age 76, both hemispheres 47.5
Hippocampus, CA3
nTPM: 50.2
2620 Female, age 94, left hemisphere 53.0
1891 Female, age 85, both hemispheres 51.3
2861 Female, age 67, both hemispheres 51.2
1867 Male, age 76, both hemispheres 49.8
2137 Male, age 80, left hemisphere 49.0
2436 Male, age 74, both hemispheres 47.0
Parahippocampal cortex
nTPM: 47.3
2018 Male, age 76, both hemispheres 49.7
2692 Male, age 74, both hemispheres 49.7
2532 Female, age 72, left hemisphere 48.0
1850 Male, age 80, both hemispheres 47.4
1990 Female, age 91, right hemisphere 47.3
1933 Female, age 85, both hemispheres 47.0
2622 Female, age 67, right hemisphere 46.8
2693 Female, age 94, both hemispheres 46.7
2245 Female, age 91, both hemispheres 45.2
2250 Female, age 67, right hemisphere 44.9
Perirhinal gyrus
nTPM: 46.6
2848 Male, age 76, right hemisphere 47.4
1794 Male, age 80, right hemisphere 46.7
1847 Female, age 91, left hemisphere 46.6
2521 Female, age 94, right hemisphere 46.4
1841 Female, age 85, right hemisphere 46.0
Subiculum
nTPM: 49.7
2042 Male, age 76, both hemispheres 51.6
2619 Male, age 74, both hemispheres 50.7
1901 Male, age 80, both hemispheres 50.4
1977 Female, age 85, both hemispheres 49.6
2729 Female, age 91, right hemisphere 49.1
2438 Female, age 94, left hemisphere 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.5
Samples: 197

Max nTPM: 61.7
Min nTPM: 21.6
Std nTPM: 7.7
Median nTPM: 32.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 61.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 60.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 56.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 52.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 50.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 49.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 49.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 48.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 48.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.9
FF:10153-102I9 76 years, female 97.3
FF:10169-103B7 60 years, female 80.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 59.5
Min nTPM: 36.9
Sample A Female 59.5
Sample B Female 43.3
Sample C Male 41.8
Sample D Male 36.9
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 41.2
Min nTPM: 31.1
Sample A Female 41.2
Sample B Female 37.5
Sample C Male 38.3
Sample D Male 31.1
Subiculum
nTPM: 38.6
Samples: 4

Max nTPM: 48.7
Min nTPM: 33.1
Sample A Female 48.7
Sample B Female 35.6
Sample C Male 37.1
Sample D Male 33.1
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 53.9
Min nTPM: 31.3
Sample A Female 46.8
Sample B Female 31.3
Sample C Male 53.9
Sample D Male 45.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.4
Samples: 4

Max nTPM: 38.8
Min nTPM: 36.3
Sample A Male 36.3
Sample B Male 37.1
Sample C Female 37.2
Sample D Female 38.8
Hippocampal formation
nTPM: 38.8
Samples: 4

Max nTPM: 39.7
Min nTPM: 37.2
Sample A Male 39.5
Sample B Male 38.7
Sample C Female 39.7
Sample D Female 37.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71487151 Antisense, RP_050913_01_D02, Mouse strain C57BL/6J (56 days, male) 0.1

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