ABOUTMENU
HELP
NEWS
SUN2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:118.3 nTPM
HPA:118.3 nTPM
GTEx:101.5 nTPM
FANTOM5:208.0 Scaled Tags Per Million
Pig:16.5 nTPM
Mouse:20.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001209
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 118.3
Sample id Sample description nTPM
Hippocampus
nTPM: 107.1
1911 Female, age 85, right hemisphere 114.0
2148 Female, age 91, left hemisphere 112.2
2621 Female, age 67, right hemisphere 107.0
1855 Male, age 76, left hemisphere 106.6
1898 Male, age 80, left hemisphere 105.3
2529 Female, age 94, left hemisphere 97.4
Dentate gyrus
nTPM: 113.1
2530 Female, age 94, left hemisphere 143.7
2528 Male, age 74, both hemispheres 118.7
2010 Male, age 76, both hemispheres 112.3
2531 Female, age 67, both hemispheres 109.8
2246 Female, age 85, both hemispheres 105.4
1927 Female, age 91, both hemispheres 88.9
Entorhinal gyrus
nTPM: 97.8
2117 Female, age 91, right hemisphere 149.4
2764 Male, age 80, right hemisphere 125.5
2613 Female, age 94, left hemisphere 83.8
1787 Male, age 76, left hemisphere 82.1
1938 Female, age 85, left hemisphere 80.7
2686 Male, age 75, right hemisphere 65.6
Hippocampus, CA1
nTPM: 99.8
1873 Female, age 85, both hemispheres 108.5
2082 Female, age 91, right hemisphere 106.6
2527 Male, age 74, both hemispheres 105.8
2749 Male, age 80, left hemisphere 90.2
2045 Male, age 76, both hemispheres 87.8
Hippocampus, CA2
nTPM: 111.8
1963 Male, age 80, left hemisphere 132.3
2249 Male, age 74, both hemispheres 124.7
2113 Female, age 91, right hemisphere 120.0
1940 Female, age 85, left hemisphere 113.6
2437 Female, age 94, left hemisphere 107.7
1892 Male, age 76, both hemispheres 72.5
Hippocampus, CA3
nTPM: 96.1
1891 Female, age 85, both hemispheres 127.9
2620 Female, age 94, left hemisphere 123.4
2861 Female, age 67, both hemispheres 84.9
1867 Male, age 76, both hemispheres 84.6
2436 Male, age 74, both hemispheres 84.0
2137 Male, age 80, left hemisphere 71.9
Parahippocampal cortex
nTPM: 82.5
1990 Female, age 91, right hemisphere 114.6
2692 Male, age 74, both hemispheres 106.1
2532 Female, age 72, left hemisphere 101.3
2018 Male, age 76, both hemispheres 88.0
2245 Female, age 91, both hemispheres 82.1
1933 Female, age 85, both hemispheres 73.9
1850 Male, age 80, both hemispheres 71.1
2693 Female, age 94, both hemispheres 67.7
2250 Female, age 67, right hemisphere 65.4
2622 Female, age 67, right hemisphere 55.0
Perirhinal gyrus
nTPM: 65.3
2521 Female, age 94, right hemisphere 84.3
1794 Male, age 80, right hemisphere 66.7
1847 Female, age 91, left hemisphere 64.9
2848 Male, age 76, right hemisphere 55.5
1841 Female, age 85, right hemisphere 55.1
Subiculum
nTPM: 118.3
2042 Male, age 76, both hemispheres 152.3
1901 Male, age 80, both hemispheres 137.0
2619 Male, age 74, both hemispheres 113.3
1977 Female, age 85, both hemispheres 112.4
2729 Female, age 91, right hemisphere 107.2
2438 Female, age 94, left hemisphere 87.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.5
Samples: 197

Max nTPM: 350.3
Min nTPM: 20.3
Std nTPM: 59.4
Median nTPM: 86.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 350.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 319.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 303.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 302.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 284.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 280.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 270.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 256.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 245.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 244.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 227.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 208.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 208.0
FF:10153-102I9 76 years, female 230.8
FF:10169-103B7 60 years, female 185.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 17.5
Min nTPM: 10.1
Sample A Female 17.5
Sample B Female 15.7
Sample C Male 15.5
Sample D Male 10.1
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.2
Min nTPM: 10.0
Sample A Female 12.5
Sample B Female 14.2
Sample C Male 12.9
Sample D Male 10.0
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 15.4
Min nTPM: 13.3
Sample A Female 15.4
Sample B Female 15.2
Sample C Male 13.7
Sample D Male 13.3
Ventral hippocampus
nTPM: 16.5
Samples: 4

Max nTPM: 21.9
Min nTPM: 13.5
Sample A Female 15.7
Sample B Female 13.5
Sample C Male 21.9
Sample D Male 14.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.6
Sample A Male 23.1
Sample B Male 20.7
Sample C Female 18.6
Sample D Female 20.0
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.8
Sample A Male 16.6
Sample B Male 14.8
Sample C Female 16.3
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69527860 Antisense, RP_050421_02_F04, Mouse strain C57BL/6J (56 days, male) 1.1
74658032 Antisense, RP_060220_04_C05, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.