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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:9.5 nTPM
HPA:9.5 nTPM
GTEx:14.6 nTPM
FANTOM5:8.9 Scaled Tags Per Million
Pig:53.7 nTPM
Mouse:6.3 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003054Antibody CAB046029
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.6
2621 Female, age 67, right hemisphere 12.0
2529 Female, age 94, left hemisphere 9.8
2148 Female, age 91, left hemisphere 9.3
1911 Female, age 85, right hemisphere 8.1
1898 Male, age 80, left hemisphere 6.9
1855 Male, age 76, left hemisphere 5.3
Dentate gyrus
nTPM: 8.0
2530 Female, age 94, left hemisphere 11.0
2531 Female, age 67, both hemispheres 10.2
1927 Female, age 91, both hemispheres 7.8
2246 Female, age 85, both hemispheres 7.2
2528 Male, age 74, both hemispheres 6.9
2010 Male, age 76, both hemispheres 4.9
Entorhinal gyrus
nTPM: 8.8
2613 Female, age 94, left hemisphere 13.2
2764 Male, age 80, right hemisphere 9.3
2686 Male, age 75, right hemisphere 8.2
1938 Female, age 85, left hemisphere 7.6
1787 Male, age 76, left hemisphere 7.2
2117 Female, age 91, right hemisphere 7.1
Hippocampus, CA1
nTPM: 8.3
2749 Male, age 80, left hemisphere 13.5
2527 Male, age 74, both hemispheres 8.4
1873 Female, age 85, both hemispheres 7.5
2082 Female, age 91, right hemisphere 6.9
2045 Male, age 76, both hemispheres 5.2
Hippocampus, CA2
nTPM: 8.3
2437 Female, age 94, left hemisphere 11.3
1963 Male, age 80, left hemisphere 10.0
1892 Male, age 76, both hemispheres 9.0
2113 Female, age 91, right hemisphere 7.4
2249 Male, age 74, both hemispheres 6.9
1940 Female, age 85, left hemisphere 5.2
Hippocampus, CA3
nTPM: 9.5
2861 Female, age 67, both hemispheres 13.6
2137 Male, age 80, left hemisphere 13.0
2620 Female, age 94, left hemisphere 11.2
1867 Male, age 76, both hemispheres 6.9
1891 Female, age 85, both hemispheres 6.4
2436 Male, age 74, both hemispheres 5.8
Parahippocampal cortex
nTPM: 8.6
2622 Female, age 67, right hemisphere 12.7
2532 Female, age 72, left hemisphere 11.3
2245 Female, age 91, both hemispheres 10.4
2692 Male, age 74, both hemispheres 8.4
1850 Male, age 80, both hemispheres 8.1
2693 Female, age 94, both hemispheres 8.0
2250 Female, age 67, right hemisphere 7.8
1933 Female, age 85, both hemispheres 7.3
1990 Female, age 91, right hemisphere 7.2
2018 Male, age 76, both hemispheres 5.1
Perirhinal gyrus
nTPM: 8.7
1794 Male, age 80, right hemisphere 9.9
2521 Female, age 94, right hemisphere 9.2
1847 Female, age 91, left hemisphere 8.7
1841 Female, age 85, right hemisphere 8.4
2848 Male, age 76, right hemisphere 7.5
Subiculum
nTPM: 7.6
2438 Female, age 94, left hemisphere 11.5
2619 Male, age 74, both hemispheres 8.8
1901 Male, age 80, both hemispheres 7.7
1977 Female, age 85, both hemispheres 6.8
2729 Female, age 91, right hemisphere 6.3
2042 Male, age 76, both hemispheres 4.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.6
Samples: 197

Max nTPM: 39.6
Min nTPM: 4.9
Std nTPM: 5.9
Median nTPM: 13.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 33.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 26.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 26.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 26.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 26.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 25.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 24.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 24.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.9
FF:10153-102I9 76 years, female 10.6
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 44.4
Min nTPM: 30.1
Sample A Female 40.0
Sample B Female 44.4
Sample C Male 40.9
Sample D Male 30.1
Entorhinal cortex
nTPM: 53.7
Samples: 4

Max nTPM: 63.2
Min nTPM: 46.7
Sample A Female 48.4
Sample B Female 56.4
Sample C Male 63.2
Sample D Male 46.7
Subiculum
nTPM: 48.0
Samples: 4

Max nTPM: 62.5
Min nTPM: 34.5
Sample A Female 62.5
Sample B Female 50.2
Sample C Male 44.6
Sample D Male 34.5
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 63.7
Min nTPM: 35.9
Sample A Female 35.9
Sample B Female 41.9
Sample C Male 63.7
Sample D Male 40.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 7.9
Min nTPM: 4.6
Sample A Male 7.3
Sample B Male 7.9
Sample C Female 5.2
Sample D Female 4.6
Hippocampal formation
nTPM: 6.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.5
Sample A Male 5.6
Sample B Male 5.5
Sample C Female 6.6
Sample D Female 6.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68667982 Antisense, RP_050203_01_B11, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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