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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:24.3 nTPM
HPA:24.3 nTPM
GTEx:25.7 nTPM
FANTOM5:95.3 Scaled Tags Per Million
Pig:94.4 nTPM
Mouse:93.2 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006240Antibody HPA075862
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 4.0
2621 Female, age 67, right hemisphere 10.3
2148 Female, age 91, left hemisphere 7.0
1898 Male, age 80, left hemisphere 5.5
1855 Male, age 76, left hemisphere 1.2
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 6.7
1927 Female, age 91, both hemispheres 19.1
2531 Female, age 67, both hemispheres 14.0
2246 Female, age 85, both hemispheres 7.2
2010 Male, age 76, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 8.6
2613 Female, age 94, left hemisphere 14.9
2764 Male, age 80, right hemisphere 11.7
1787 Male, age 76, left hemisphere 9.9
1938 Female, age 85, left hemisphere 8.5
2686 Male, age 75, right hemisphere 6.4
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 8.0
2749 Male, age 80, left hemisphere 21.3
1873 Female, age 85, both hemispheres 7.7
2045 Male, age 76, both hemispheres 6.7
2527 Male, age 74, both hemispheres 4.6
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 4.4
1892 Male, age 76, both hemispheres 12.9
2437 Female, age 94, left hemisphere 7.9
1963 Male, age 80, left hemisphere 6.1
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 9.8
2620 Female, age 94, left hemisphere 23.2
2137 Male, age 80, left hemisphere 21.9
2861 Female, age 67, both hemispheres 10.6
1867 Male, age 76, both hemispheres 3.2
2436 Male, age 74, both hemispheres 0.3
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 12.6
2693 Female, age 94, both hemispheres 20.8
2245 Female, age 91, both hemispheres 19.1
1850 Male, age 80, both hemispheres 17.1
2622 Female, age 67, right hemisphere 15.6
2532 Female, age 72, left hemisphere 14.8
1990 Female, age 91, right hemisphere 13.3
2250 Female, age 67, right hemisphere 11.6
1933 Female, age 85, both hemispheres 11.2
2018 Male, age 76, both hemispheres 2.8
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 24.3
1847 Female, age 91, left hemisphere 31.6
2521 Female, age 94, right hemisphere 28.5
1794 Male, age 80, right hemisphere 25.9
1841 Female, age 85, right hemisphere 18.4
2848 Male, age 76, right hemisphere 16.9
Subiculum
nTPM: 3.5
2438 Female, age 94, left hemisphere 10.5
1977 Female, age 85, both hemispheres 8.4
1901 Male, age 80, both hemispheres 2.5
2042 Male, age 76, both hemispheres 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.7
Samples: 197

Max nTPM: 62.9
Min nTPM: 8.9
Std nTPM: 11.2
Median nTPM: 23.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 62.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 61.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 58.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 58.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 55.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 55.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 50.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 50.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 49.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 47.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.3
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 86.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.0
Samples: 4

Max nTPM: 88.5
Min nTPM: 61.8
Sample A Female 82.1
Sample B Female 88.5
Sample C Male 61.8
Sample D Male 71.7
Entorhinal cortex
nTPM: 94.5
Samples: 4

Max nTPM: 102.0
Min nTPM: 86.8
Sample A Female 98.3
Sample B Female 86.8
Sample C Male 102.0
Sample D Male 90.7
Subiculum
nTPM: 88.1
Samples: 4

Max nTPM: 112.0
Min nTPM: 74.3
Sample A Female 112.0
Sample B Female 82.9
Sample C Male 83.0
Sample D Male 74.3
Ventral hippocampus
nTPM: 78.5
Samples: 4

Max nTPM: 92.4
Min nTPM: 66.3
Sample A Female 66.3
Sample B Female 70.3
Sample C Male 92.4
Sample D Male 84.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.2
Samples: 4

Max nTPM: 106.4
Min nTPM: 86.1
Sample A Male 86.1
Sample B Male 93.8
Sample C Female 86.5
Sample D Female 106.4
Hippocampal formation
nTPM: 79.9
Samples: 4

Max nTPM: 83.5
Min nTPM: 75.5
Sample A Male 83.5
Sample B Male 82.6
Sample C Female 75.5
Sample D Female 78.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
71325402 Antisense, RP_050825_02_G09, Mouse strain C57BL/6J (56 days, male) 10.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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