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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:25.1 nTPM
HPA:25.1 nTPM
GTEx:31.7 nTPM
FANTOM5:16.4 Scaled Tags Per Million
Pig:2.1 nTPM
Mouse:2.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005696Antibody HPA024654
Glial cells HighMedium
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 18.6
1911 Female, age 85, right hemisphere 23.9
2529 Female, age 94, left hemisphere 19.0
2148 Female, age 91, left hemisphere 18.5
2621 Female, age 67, right hemisphere 17.0
1855 Male, age 76, left hemisphere 16.7
1898 Male, age 80, left hemisphere 16.5
Dentate gyrus
nTPM: 18.7
2530 Female, age 94, left hemisphere 24.7
2528 Male, age 74, both hemispheres 22.9
2010 Male, age 76, both hemispheres 19.6
2246 Female, age 85, both hemispheres 16.4
1927 Female, age 91, both hemispheres 14.6
2531 Female, age 67, both hemispheres 13.7
Entorhinal gyrus
nTPM: 20.0
2117 Female, age 91, right hemisphere 32.2
2764 Male, age 80, right hemisphere 26.9
1938 Female, age 85, left hemisphere 17.3
1787 Male, age 76, left hemisphere 16.1
2686 Male, age 75, right hemisphere 15.0
2613 Female, age 94, left hemisphere 12.6
Hippocampus, CA1
nTPM: 16.4
2082 Female, age 91, right hemisphere 21.9
1873 Female, age 85, both hemispheres 19.1
2527 Male, age 74, both hemispheres 18.1
2749 Male, age 80, left hemisphere 13.4
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 19.4
2249 Male, age 74, both hemispheres 23.7
1963 Male, age 80, left hemisphere 22.1
2437 Female, age 94, left hemisphere 20.6
2113 Female, age 91, right hemisphere 20.0
1940 Female, age 85, left hemisphere 17.5
1892 Male, age 76, both hemispheres 12.7
Hippocampus, CA3
nTPM: 15.5
1891 Female, age 85, both hemispheres 24.0
2620 Female, age 94, left hemisphere 21.7
1867 Male, age 76, both hemispheres 15.9
2436 Male, age 74, both hemispheres 12.9
2137 Male, age 80, left hemisphere 9.8
2861 Female, age 67, both hemispheres 8.8
Parahippocampal cortex
nTPM: 15.5
2692 Male, age 74, both hemispheres 24.3
2532 Female, age 72, left hemisphere 20.5
1990 Female, age 91, right hemisphere 20.2
2018 Male, age 76, both hemispheres 16.1
1850 Male, age 80, both hemispheres 15.7
2245 Female, age 91, both hemispheres 15.0
1933 Female, age 85, both hemispheres 13.7
2693 Female, age 94, both hemispheres 12.0
2250 Female, age 67, right hemisphere 9.0
2622 Female, age 67, right hemisphere 8.9
Perirhinal gyrus
nTPM: 11.1
1794 Male, age 80, right hemisphere 13.6
2521 Female, age 94, right hemisphere 12.0
2848 Male, age 76, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.5
1841 Female, age 85, right hemisphere 8.6
Subiculum
nTPM: 25.1
2042 Male, age 76, both hemispheres 35.0
1901 Male, age 80, both hemispheres 30.9
2619 Male, age 74, both hemispheres 23.1
2729 Female, age 91, right hemisphere 21.1
1977 Female, age 85, both hemispheres 20.9
2438 Female, age 94, left hemisphere 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.7
Samples: 197

Max nTPM: 173.4
Min nTPM: 2.4
Std nTPM: 21.1
Median nTPM: 26.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 173.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 100.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 97.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 93.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 88.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 86.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 85.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 74.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 73.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 70.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 68.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.4
FF:10169-103B7 60 years, female 18.8
FF:10153-102I9 76 years, female 14.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.1
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.2
Sample A Female 3.5
Sample B Female 1.2
Sample C Male 2.6
Sample D Male 1.2
Entorhinal cortex
nTPM: 1.2
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.8
Sample A Female 1.4
Sample B Female 0.9
Sample C Male 1.7
Sample D Male 0.8
Subiculum
nTPM: 1.3
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.8
Sample A Female 2.0
Sample B Female 0.8
Sample C Male 1.0
Sample D Male 1.5
Ventral hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.6
Min nTPM: 0.9
Sample A Female 1.8
Sample B Female 0.9
Sample C Male 2.1
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.5
Sample A Male 2.3
Sample B Male 1.5
Sample C Female 2.1
Sample D Female 1.6
Hippocampal formation
nTPM: 2.8
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.0
Sample A Male 2.1
Sample B Male 2.0
Sample C Female 2.9
Sample D Female 4.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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