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ATP6V1D
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:107.2 nTPM
HPA:107.2 nTPM
GTEx:107.0 nTPM
FANTOM5:135.5 Scaled Tags Per Million
Pig:60.3 nTPM
Mouse:98.0 nTPM
Allen mouse:20.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031515Antibody HPA057316
Glial cells LowNot detected
Neuronal cells MediumNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.2
Sample id Sample description nTPM
Hippocampus
nTPM: 92.3
1898 Male, age 80, left hemisphere 106.0
1855 Male, age 76, left hemisphere 94.1
2621 Female, age 67, right hemisphere 89.9
2529 Female, age 94, left hemisphere 89.3
2148 Female, age 91, left hemisphere 87.3
1911 Female, age 85, right hemisphere 86.9
Dentate gyrus
nTPM: 93.5
1927 Female, age 91, both hemispheres 101.9
2010 Male, age 76, both hemispheres 95.5
2530 Female, age 94, left hemisphere 94.6
2246 Female, age 85, both hemispheres 92.7
2528 Male, age 74, both hemispheres 92.1
2531 Female, age 67, both hemispheres 84.2
Entorhinal gyrus
nTPM: 91.6
1938 Female, age 85, left hemisphere 98.8
2764 Male, age 80, right hemisphere 97.9
1787 Male, age 76, left hemisphere 93.2
2613 Female, age 94, left hemisphere 92.1
2117 Female, age 91, right hemisphere 84.6
2686 Male, age 75, right hemisphere 82.7
Hippocampus, CA1
nTPM: 99.0
2749 Male, age 80, left hemisphere 117.7
1873 Female, age 85, both hemispheres 98.9
2045 Male, age 76, both hemispheres 95.0
2527 Male, age 74, both hemispheres 94.2
2082 Female, age 91, right hemisphere 88.9
Hippocampus, CA2
nTPM: 95.3
1892 Male, age 76, both hemispheres 108.5
1963 Male, age 80, left hemisphere 102.2
2249 Male, age 74, both hemispheres 95.4
1940 Female, age 85, left hemisphere 91.1
2113 Female, age 91, right hemisphere 88.9
2437 Female, age 94, left hemisphere 85.6
Hippocampus, CA3
nTPM: 93.5
2137 Male, age 80, left hemisphere 107.2
2436 Male, age 74, both hemispheres 97.6
1867 Male, age 76, both hemispheres 96.0
1891 Female, age 85, both hemispheres 89.5
2620 Female, age 94, left hemisphere 88.5
2861 Female, age 67, both hemispheres 82.2
Parahippocampal cortex
nTPM: 95.5
1850 Male, age 80, both hemispheres 109.1
1933 Female, age 85, both hemispheres 103.4
1990 Female, age 91, right hemisphere 96.6
2250 Female, age 67, right hemisphere 96.6
2532 Female, age 72, left hemisphere 96.5
2245 Female, age 91, both hemispheres 96.3
2018 Male, age 76, both hemispheres 93.7
2693 Female, age 94, both hemispheres 92.0
2692 Male, age 74, both hemispheres 86.4
2622 Female, age 67, right hemisphere 84.4
Perirhinal gyrus
nTPM: 107.2
1847 Female, age 91, left hemisphere 116.8
1841 Female, age 85, right hemisphere 108.3
1794 Male, age 80, right hemisphere 108.0
2521 Female, age 94, right hemisphere 104.4
2848 Male, age 76, right hemisphere 98.7
Subiculum
nTPM: 89.9
1977 Female, age 85, both hemispheres 98.8
1901 Male, age 80, both hemispheres 93.4
2619 Male, age 74, both hemispheres 89.7
2438 Female, age 94, left hemisphere 88.0
2729 Female, age 91, right hemisphere 84.9
2042 Male, age 76, both hemispheres 84.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.0
Samples: 197

Max nTPM: 242.9
Min nTPM: 43.8
Std nTPM: 36.3
Median nTPM: 101.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 242.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 213.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 197.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 189.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 188.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 187.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 182.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 178.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 176.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 173.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 171.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 135.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 135.5
FF:10169-103B7 60 years, female 167.4
FF:10153-102I9 76 years, female 103.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.3
Samples: 4

Max nTPM: 80.6
Min nTPM: 43.8
Sample A Female 80.6
Sample B Female 64.1
Sample C Male 52.6
Sample D Male 43.8
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 57.1
Min nTPM: 37.5
Sample A Female 54.8
Sample B Female 57.1
Sample C Male 48.0
Sample D Male 37.5
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 64.1
Min nTPM: 41.3
Sample A Female 64.1
Sample B Female 43.9
Sample C Male 43.1
Sample D Male 41.3
Ventral hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 71.6
Min nTPM: 44.4
Sample A Female 71.6
Sample B Female 44.4
Sample C Male 51.6
Sample D Male 47.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.0
Samples: 4

Max nTPM: 104.3
Min nTPM: 91.5
Sample A Male 91.5
Sample B Male 101.0
Sample C Female 95.3
Sample D Female 104.3
Hippocampal formation
nTPM: 94.5
Samples: 4

Max nTPM: 104.7
Min nTPM: 84.7
Sample A Male 104.7
Sample B Male 95.1
Sample C Female 93.3
Sample D Female 84.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
67787352 Antisense, RP_040920_01_A06, Mouse strain C57BL/6J (56 days, male) 22.4
74047915 Antisense, RP_051214_02_C12, Mouse strain C57BL/6J (56 days, male) 18.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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