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PSMA3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:51.2 nTPM
HPA:51.2 nTPM
GTEx:43.9 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:30.1 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000905
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.2
Sample id Sample description nTPM
Hippocampus
nTPM: 49.4
1898 Male, age 80, left hemisphere 54.6
1855 Male, age 76, left hemisphere 49.4
2529 Female, age 94, left hemisphere 49.4
1911 Female, age 85, right hemisphere 48.6
2621 Female, age 67, right hemisphere 47.5
2148 Female, age 91, left hemisphere 47.1
Dentate gyrus
nTPM: 48.0
2010 Male, age 76, both hemispheres 50.5
1927 Female, age 91, both hemispheres 50.2
2246 Female, age 85, both hemispheres 47.7
2530 Female, age 94, left hemisphere 47.4
2528 Male, age 74, both hemispheres 46.0
2531 Female, age 67, both hemispheres 45.9
Entorhinal gyrus
nTPM: 47.4
1938 Female, age 85, left hemisphere 49.9
1787 Male, age 76, left hemisphere 48.2
2764 Male, age 80, right hemisphere 48.1
2117 Female, age 91, right hemisphere 47.1
2686 Male, age 75, right hemisphere 46.7
2613 Female, age 94, left hemisphere 44.5
Hippocampus, CA1
nTPM: 49.2
2749 Male, age 80, left hemisphere 52.7
1873 Female, age 85, both hemispheres 50.0
2527 Male, age 74, both hemispheres 48.6
2082 Female, age 91, right hemisphere 47.8
2045 Male, age 76, both hemispheres 46.9
Hippocampus, CA2
nTPM: 50.2
2249 Male, age 74, both hemispheres 54.8
1892 Male, age 76, both hemispheres 52.3
1963 Male, age 80, left hemisphere 50.4
1940 Female, age 85, left hemisphere 48.7
2437 Female, age 94, left hemisphere 48.0
2113 Female, age 91, right hemisphere 47.0
Hippocampus, CA3
nTPM: 48.4
1867 Male, age 76, both hemispheres 52.1
2137 Male, age 80, left hemisphere 51.1
2436 Male, age 74, both hemispheres 48.9
1891 Female, age 85, both hemispheres 48.8
2620 Female, age 94, left hemisphere 45.2
2861 Female, age 67, both hemispheres 44.2
Parahippocampal cortex
nTPM: 48.8
2250 Female, age 67, right hemisphere 51.2
1850 Male, age 80, both hemispheres 51.1
1990 Female, age 91, right hemisphere 50.1
1933 Female, age 85, both hemispheres 49.8
2018 Male, age 76, both hemispheres 49.3
2693 Female, age 94, both hemispheres 48.8
2245 Female, age 91, both hemispheres 48.1
2692 Male, age 74, both hemispheres 47.2
2532 Female, age 72, left hemisphere 46.5
2622 Female, age 67, right hemisphere 45.7
Perirhinal gyrus
nTPM: 51.2
1847 Female, age 91, left hemisphere 52.3
1794 Male, age 80, right hemisphere 52.2
1841 Female, age 85, right hemisphere 52.1
2521 Female, age 94, right hemisphere 50.1
2848 Male, age 76, right hemisphere 49.2
Subiculum
nTPM: 48.5
1901 Male, age 80, both hemispheres 50.0
1977 Female, age 85, both hemispheres 49.4
2042 Male, age 76, both hemispheres 48.2
2438 Female, age 94, left hemisphere 47.8
2729 Female, age 91, right hemisphere 47.8
2619 Male, age 74, both hemispheres 47.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.9
Samples: 197

Max nTPM: 118.7
Min nTPM: 23.4
Std nTPM: 12.1
Median nTPM: 41.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 118.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 114.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 103.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 72.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 66.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 62.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 62.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 61.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 60.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.2
FF:10169-103B7 60 years, female 82.6
FF:10153-102I9 76 years, female 39.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 56.3
Min nTPM: 34.2
Sample A Female 56.3
Sample B Female 44.8
Sample C Male 45.6
Sample D Male 34.2
Entorhinal cortex
nTPM: 36.4
Samples: 4

Max nTPM: 45.0
Min nTPM: 31.1
Sample A Female 34.1
Sample B Female 45.0
Sample C Male 35.4
Sample D Male 31.1
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 42.5
Min nTPM: 34.2
Sample A Female 42.5
Sample B Female 37.3
Sample C Male 34.6
Sample D Male 34.2
Ventral hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 42.9
Min nTPM: 34.7
Sample A Female 42.9
Sample B Female 37.2
Sample C Male 34.7
Sample D Male 42.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 37.2
Min nTPM: 27.2
Sample A Male 37.2
Sample B Male 27.2
Sample C Female 28.4
Sample D Female 27.5
Hippocampal formation
nTPM: 26.4
Samples: 4

Max nTPM: 31.4
Min nTPM: 21.1
Sample A Male 27.3
Sample B Male 25.6
Sample C Female 31.4
Sample D Female 21.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
69817402 Antisense, RP_050510_03_C11, Mouse strain C57BL/6J (56 days, male) 11.5

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