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GALNT16
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:27.0 nTPM
HPA:27.0 nTPM
GTEx:17.9 nTPM
FANTOM5:61.8 Scaled Tags Per Million
Pig:37.2 nTPM
Mouse:112.2 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059136
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
2148 Female, age 91, left hemisphere 32.2
2621 Female, age 67, right hemisphere 26.8
1898 Male, age 80, left hemisphere 19.2
1855 Male, age 76, left hemisphere 19.0
1911 Female, age 85, right hemisphere 17.5
2529 Female, age 94, left hemisphere 15.7
Dentate gyrus
nTPM: 25.1
2531 Female, age 67, both hemispheres 34.5
1927 Female, age 91, both hemispheres 34.1
2528 Male, age 74, both hemispheres 22.8
2530 Female, age 94, left hemisphere 21.0
2010 Male, age 76, both hemispheres 19.7
2246 Female, age 85, both hemispheres 18.8
Entorhinal gyrus
nTPM: 20.9
2613 Female, age 94, left hemisphere 26.7
2686 Male, age 75, right hemisphere 25.8
2764 Male, age 80, right hemisphere 20.4
1938 Female, age 85, left hemisphere 19.3
1787 Male, age 76, left hemisphere 17.7
2117 Female, age 91, right hemisphere 15.4
Hippocampus, CA1
nTPM: 22.6
2045 Male, age 76, both hemispheres 27.7
2749 Male, age 80, left hemisphere 24.1
1873 Female, age 85, both hemispheres 23.4
2527 Male, age 74, both hemispheres 21.3
2082 Female, age 91, right hemisphere 16.4
Hippocampus, CA2
nTPM: 18.1
1892 Male, age 76, both hemispheres 24.2
1963 Male, age 80, left hemisphere 21.0
2249 Male, age 74, both hemispheres 17.7
2437 Female, age 94, left hemisphere 16.6
2113 Female, age 91, right hemisphere 16.4
1940 Female, age 85, left hemisphere 12.9
Hippocampus, CA3
nTPM: 27.0
2620 Female, age 94, left hemisphere 49.3
2861 Female, age 67, both hemispheres 34.2
2137 Male, age 80, left hemisphere 23.2
1867 Male, age 76, both hemispheres 19.0
2436 Male, age 74, both hemispheres 18.8
1891 Female, age 85, both hemispheres 17.5
Parahippocampal cortex
nTPM: 17.9
2693 Female, age 94, both hemispheres 22.3
2622 Female, age 67, right hemisphere 19.3
2245 Female, age 91, both hemispheres 18.7
1933 Female, age 85, both hemispheres 18.0
1850 Male, age 80, both hemispheres 17.7
2692 Male, age 74, both hemispheres 17.7
2250 Female, age 67, right hemisphere 17.3
1990 Female, age 91, right hemisphere 16.9
2532 Female, age 72, left hemisphere 16.1
2018 Male, age 76, both hemispheres 14.9
Perirhinal gyrus
nTPM: 19.5
1847 Female, age 91, left hemisphere 24.5
2848 Male, age 76, right hemisphere 20.9
1794 Male, age 80, right hemisphere 17.8
2521 Female, age 94, right hemisphere 17.6
1841 Female, age 85, right hemisphere 16.8
Subiculum
nTPM: 15.9
2729 Female, age 91, right hemisphere 19.7
1977 Female, age 85, both hemispheres 18.2
1901 Male, age 80, both hemispheres 15.9
2619 Male, age 74, both hemispheres 15.0
2042 Male, age 76, both hemispheres 14.1
2438 Female, age 94, left hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 49.6
Min nTPM: 2.2
Std nTPM: 9.3
Median nTPM: 16.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 44.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 43.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 43.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 42.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 39.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 39.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 38.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 36.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.8
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 35.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 46.2
Min nTPM: 28.9
Sample A Female 40.5
Sample B Female 46.2
Sample C Male 28.9
Sample D Male 33.4
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 17.1
Min nTPM: 12.9
Sample A Female 15.3
Sample B Female 14.5
Sample C Male 17.1
Sample D Male 12.9
Subiculum
nTPM: 20.0
Samples: 4

Max nTPM: 28.5
Min nTPM: 13.9
Sample A Female 21.1
Sample B Female 16.5
Sample C Male 28.5
Sample D Male 13.9
Ventral hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 47.1
Min nTPM: 24.1
Sample A Female 26.7
Sample B Female 24.1
Sample C Male 37.8
Sample D Male 47.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.8
Samples: 4

Max nTPM: 76.1
Min nTPM: 55.2
Sample A Male 65.1
Sample B Male 55.2
Sample C Female 76.1
Sample D Female 70.8
Hippocampal formation
nTPM: 112.2
Samples: 4

Max nTPM: 127.0
Min nTPM: 98.7
Sample A Male 98.7
Sample B Male 123.3
Sample C Female 127.0
Sample D Female 99.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
71717305 Antisense, RP_050531_01_D10, Mouse strain C57BL/6J (56 days, male) 8.4
70276855 Antisense, RP_050531_01_D10, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.