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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:145.4 nTPM
HPA:145.4 nTPM
GTEx:61.3 nTPM
FANTOM5:220.4 Scaled Tags Per Million
Pig:86.3 nTPM
Mouse:119.8 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002567
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 145.4
Sample id Sample description nTPM
Hippocampus
nTPM: 141.0
1898 Male, age 80, left hemisphere 147.8
2529 Female, age 94, left hemisphere 143.5
1855 Male, age 76, left hemisphere 141.8
1911 Female, age 85, right hemisphere 138.8
2621 Female, age 67, right hemisphere 138.2
2148 Female, age 91, left hemisphere 135.7
Dentate gyrus
nTPM: 141.3
2530 Female, age 94, left hemisphere 145.7
2010 Male, age 76, both hemispheres 142.9
1927 Female, age 91, both hemispheres 142.6
2246 Female, age 85, both hemispheres 141.8
2528 Male, age 74, both hemispheres 141.5
2531 Female, age 67, both hemispheres 133.2
Entorhinal gyrus
nTPM: 138.2
1938 Female, age 85, left hemisphere 146.4
1787 Male, age 76, left hemisphere 141.2
2117 Female, age 91, right hemisphere 140.8
2764 Male, age 80, right hemisphere 139.5
2613 Female, age 94, left hemisphere 131.2
2686 Male, age 75, right hemisphere 129.9
Hippocampus, CA1
nTPM: 143.5
2749 Male, age 80, left hemisphere 150.0
2527 Male, age 74, both hemispheres 145.1
1873 Female, age 85, both hemispheres 144.7
2045 Male, age 76, both hemispheres 139.6
2082 Female, age 91, right hemisphere 138.1
Hippocampus, CA2
nTPM: 141.9
2249 Male, age 74, both hemispheres 151.2
1963 Male, age 80, left hemisphere 142.0
1892 Male, age 76, both hemispheres 140.2
2437 Female, age 94, left hemisphere 140.0
2113 Female, age 91, right hemisphere 139.9
1940 Female, age 85, left hemisphere 138.3
Hippocampus, CA3
nTPM: 138.0
2436 Male, age 74, both hemispheres 146.4
2137 Male, age 80, left hemisphere 144.7
1891 Female, age 85, both hemispheres 140.6
1867 Male, age 76, both hemispheres 138.8
2620 Female, age 94, left hemisphere 129.9
2861 Female, age 67, both hemispheres 128.0
Parahippocampal cortex
nTPM: 140.2
2250 Female, age 67, right hemisphere 148.2
1933 Female, age 85, both hemispheres 145.1
2245 Female, age 91, both hemispheres 143.0
1850 Male, age 80, both hemispheres 142.3
1990 Female, age 91, right hemisphere 142.0
2018 Male, age 76, both hemispheres 141.2
2532 Female, age 72, left hemisphere 139.6
2692 Male, age 74, both hemispheres 136.7
2693 Female, age 94, both hemispheres 134.9
2622 Female, age 67, right hemisphere 129.0
Perirhinal gyrus
nTPM: 145.4
2521 Female, age 94, right hemisphere 147.9
1841 Female, age 85, right hemisphere 147.5
1847 Female, age 91, left hemisphere 144.6
1794 Male, age 80, right hemisphere 144.5
2848 Male, age 76, right hemisphere 142.4
Subiculum
nTPM: 140.3
1977 Female, age 85, both hemispheres 145.5
1901 Male, age 80, both hemispheres 141.2
2438 Female, age 94, left hemisphere 140.6
2729 Female, age 91, right hemisphere 140.4
2042 Male, age 76, both hemispheres 138.4
2619 Male, age 74, both hemispheres 135.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.3
Samples: 197

Max nTPM: 124.6
Min nTPM: 33.8
Std nTPM: 12.7
Median nTPM: 60.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 124.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 110.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 92.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 90.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 88.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 84.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 83.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 80.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 80.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 79.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 79.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 220.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 220.4
FF:10169-103B7 60 years, female 311.8
FF:10153-102I9 76 years, female 129.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 117.9
Min nTPM: 60.3
Sample A Female 117.9
Sample B Female 83.8
Sample C Male 83.3
Sample D Male 60.3
Entorhinal cortex
nTPM: 66.9
Samples: 4

Max nTPM: 77.0
Min nTPM: 51.2
Sample A Female 63.9
Sample B Female 77.0
Sample C Male 75.4
Sample D Male 51.2
Subiculum
nTPM: 68.9
Samples: 4

Max nTPM: 95.1
Min nTPM: 57.5
Sample A Female 95.1
Sample B Female 62.9
Sample C Male 57.5
Sample D Male 60.2
Ventral hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 89.0
Min nTPM: 61.7
Sample A Female 89.0
Sample B Female 61.7
Sample C Male 79.0
Sample D Male 83.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 119.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.9
Samples: 4

Max nTPM: 123.2
Min nTPM: 101.9
Sample A Male 109.6
Sample B Male 101.9
Sample C Female 123.2
Sample D Female 105.0
Hippocampal formation
nTPM: 119.8
Samples: 4

Max nTPM: 144.8
Min nTPM: 103.4
Sample A Male 144.8
Sample B Male 119.3
Sample C Female 111.5
Sample D Female 103.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
79544842 Antisense, RP_071101_01_A05, Mouse strain C57BL/6J (56 days, male) 3.2

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