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MTHFD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:14.4 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:24.3 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000704Antibody HPA001290Antibody HPA015006Antibody HPA050052
Glial cells Not detectedMediumHighMedium
Neuronal cells LowMediumHighMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.3
1911 Female, age 85, right hemisphere 11.4
1898 Male, age 80, left hemisphere 11.2
1855 Male, age 76, left hemisphere 8.9
2621 Female, age 67, right hemisphere 8.7
2148 Female, age 91, left hemisphere 8.4
2529 Female, age 94, left hemisphere 6.9
Dentate gyrus
nTPM: 8.8
1927 Female, age 91, both hemispheres 11.3
2531 Female, age 67, both hemispheres 10.1
2246 Female, age 85, both hemispheres 9.5
2010 Male, age 76, both hemispheres 7.9
2528 Male, age 74, both hemispheres 7.9
2530 Female, age 94, left hemisphere 6.1
Entorhinal gyrus
nTPM: 8.0
1938 Female, age 85, left hemisphere 8.9
1787 Male, age 76, left hemisphere 8.7
2764 Male, age 80, right hemisphere 8.6
2117 Female, age 91, right hemisphere 8.0
2686 Male, age 75, right hemisphere 7.0
2613 Female, age 94, left hemisphere 6.7
Hippocampus, CA1
nTPM: 11.6
2749 Male, age 80, left hemisphere 21.2
1873 Female, age 85, both hemispheres 10.2
2527 Male, age 74, both hemispheres 9.5
2045 Male, age 76, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.0
Hippocampus, CA2
nTPM: 9.0
1892 Male, age 76, both hemispheres 10.9
2249 Male, age 74, both hemispheres 9.7
1940 Female, age 85, left hemisphere 8.9
1963 Male, age 80, left hemisphere 8.5
2113 Female, age 91, right hemisphere 8.4
2437 Female, age 94, left hemisphere 7.4
Hippocampus, CA3
nTPM: 12.9
2137 Male, age 80, left hemisphere 29.7
2620 Female, age 94, left hemisphere 11.2
2436 Male, age 74, both hemispheres 10.2
1867 Male, age 76, both hemispheres 10.1
1891 Female, age 85, both hemispheres 8.6
2861 Female, age 67, both hemispheres 7.5
Parahippocampal cortex
nTPM: 8.7
2245 Female, age 91, both hemispheres 11.3
1850 Male, age 80, both hemispheres 10.3
2250 Female, age 67, right hemisphere 9.9
2693 Female, age 94, both hemispheres 9.1
1933 Female, age 85, both hemispheres 9.0
2018 Male, age 76, both hemispheres 8.9
2622 Female, age 67, right hemisphere 7.4
1990 Female, age 91, right hemisphere 7.3
2692 Male, age 74, both hemispheres 7.3
2532 Female, age 72, left hemisphere 6.6
Perirhinal gyrus
nTPM: 11.6
1794 Male, age 80, right hemisphere 12.8
2521 Female, age 94, right hemisphere 12.5
1841 Female, age 85, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.2
2848 Male, age 76, right hemisphere 9.7
Subiculum
nTPM: 9.6
1901 Male, age 80, both hemispheres 14.6
2042 Male, age 76, both hemispheres 10.0
1977 Female, age 85, both hemispheres 9.7
2729 Female, age 91, right hemisphere 8.1
2438 Female, age 94, left hemisphere 7.7
2619 Male, age 74, both hemispheres 7.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.4
Samples: 197

Max nTPM: 33.3
Min nTPM: 5.1
Std nTPM: 3.9
Median nTPM: 14.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 33.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 28.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 25.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 24.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 21.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 20.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 20.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 20.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.8
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 28.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.7
Sample A Female 19.6
Sample B Female 16.4
Sample C Male 14.7
Sample D Male 16.7
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 23.7
Min nTPM: 19.8
Sample A Female 23.7
Sample B Female 19.9
Sample C Male 20.8
Sample D Male 19.8
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.1
Sample A Female 20.0
Sample B Female 16.4
Sample C Male 16.1
Sample D Male 18.0
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.1
Sample A Female 17.4
Sample B Female 14.1
Sample C Male 18.2
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 21.8
Min nTPM: 20.7
Sample A Male 21.5
Sample B Male 20.7
Sample C Female 21.5
Sample D Female 21.8
Hippocampal formation
nTPM: 24.3
Samples: 4

Max nTPM: 25.9
Min nTPM: 21.5
Sample A Male 21.5
Sample B Male 24.4
Sample C Female 25.9
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71763804 Antisense, RP_050921_02_F09, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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