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PABPN1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:185.8 nTPM
HPA:185.8 nTPM
GTEx:182.6 nTPM
FANTOM5:117.7 Scaled Tags Per Million
Mouse:0.0 nTPM
Allen mouse:15.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000637
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 185.8
Sample id Sample description nTPM
Hippocampus
nTPM: 184.0
2148 Female, age 91, left hemisphere 186.7
1911 Female, age 85, right hemisphere 186.2
1855 Male, age 76, left hemisphere 185.2
2621 Female, age 67, right hemisphere 185.2
2529 Female, age 94, left hemisphere 184.0
1898 Male, age 80, left hemisphere 176.6
Dentate gyrus
nTPM: 183.6
2531 Female, age 67, both hemispheres 193.4
2530 Female, age 94, left hemisphere 186.9
2246 Female, age 85, both hemispheres 185.8
2010 Male, age 76, both hemispheres 179.8
1927 Female, age 91, both hemispheres 179.7
2528 Male, age 74, both hemispheres 176.0
Entorhinal gyrus
nTPM: 183.4
2686 Male, age 75, right hemisphere 197.2
2613 Female, age 94, left hemisphere 186.4
2117 Female, age 91, right hemisphere 180.3
1787 Male, age 76, left hemisphere 179.5
2764 Male, age 80, right hemisphere 178.9
1938 Female, age 85, left hemisphere 178.2
Hippocampus, CA1
nTPM: 182.3
2045 Male, age 76, both hemispheres 186.8
2082 Female, age 91, right hemisphere 185.8
1873 Female, age 85, both hemispheres 182.1
2527 Male, age 74, both hemispheres 180.2
2749 Male, age 80, left hemisphere 176.6
Hippocampus, CA2
nTPM: 180.2
2113 Female, age 91, right hemisphere 185.0
1940 Female, age 85, left hemisphere 184.4
1892 Male, age 76, both hemispheres 182.5
2437 Female, age 94, left hemisphere 179.7
2249 Male, age 74, both hemispheres 175.2
1963 Male, age 80, left hemisphere 174.5
Hippocampus, CA3
nTPM: 185.3
2861 Female, age 67, both hemispheres 196.5
2620 Female, age 94, left hemisphere 188.7
1867 Male, age 76, both hemispheres 185.8
2137 Male, age 80, left hemisphere 185.3
1891 Female, age 85, both hemispheres 182.4
2436 Male, age 74, both hemispheres 172.8
Parahippocampal cortex
nTPM: 184.5
2622 Female, age 67, right hemisphere 198.0
2692 Male, age 74, both hemispheres 188.8
2532 Female, age 72, left hemisphere 188.1
2693 Female, age 94, both hemispheres 187.3
2245 Female, age 91, both hemispheres 186.9
2018 Male, age 76, both hemispheres 184.5
1850 Male, age 80, both hemispheres 179.6
1933 Female, age 85, both hemispheres 178.1
1990 Female, age 91, right hemisphere 178.0
2250 Female, age 67, right hemisphere 175.7
Perirhinal gyrus
nTPM: 179.2
2848 Male, age 76, right hemisphere 189.2
2521 Female, age 94, right hemisphere 180.1
1841 Female, age 85, right hemisphere 179.3
1794 Male, age 80, right hemisphere 174.4
1847 Female, age 91, left hemisphere 172.9
Subiculum
nTPM: 185.8
2438 Female, age 94, left hemisphere 202.2
2042 Male, age 76, both hemispheres 188.2
2729 Female, age 91, right hemisphere 183.8
2619 Male, age 74, both hemispheres 182.6
1901 Male, age 80, both hemispheres 180.1
1977 Female, age 85, both hemispheres 177.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 182.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 182.6
Samples: 197

Max nTPM: 295.2
Min nTPM: 98.8
Std nTPM: 35.1
Median nTPM: 179.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 295.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 277.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 275.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 272.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 260.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 254.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 250.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 250.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 244.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 243.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 243.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.7
FF:10153-102I9 76 years, female 172.7
FF:10169-103B7 60 years, female 62.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.9
Samples: 4

Max nTPM: 80.5
Min nTPM: 44.4
Sample A Male 61.9
Sample B Male 80.5
Sample C Female 72.6
Sample D Female 44.4
Hippocampal formation
nTPM: 69.0
Samples: 4

Max nTPM: 80.4
Min nTPM: 56.3
Sample A Male 80.4
Sample B Male 73.7
Sample C Female 56.3
Sample D Female 65.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.3
74431266 Antisense, RP_060207_01_F12, Mouse strain C57BL/6J (56 days, male) 15.3
70919579 Antisense, RP_050713_01_F03, Mouse strain C57BL/6J (56 days, male) 4.3
Hippocampal formation
Expression energy: 15.3
74431266 Antisense, RP_060207_01_F12, Mouse strain C57BL/6J (56 days, male) 15.3
70919579 Antisense, RP_050713_01_F03, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.