ABOUTMENU
HELP
NEWS
GSS
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.4 nTPM
HPA:25.4 nTPM
GTEx:22.6 nTPM
FANTOM5:18.9 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:23.5 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054508Antibody HPA059315
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.9
1898 Male, age 80, left hemisphere 25.7
1911 Female, age 85, right hemisphere 23.7
2621 Female, age 67, right hemisphere 23.3
2148 Female, age 91, left hemisphere 22.2
2529 Female, age 94, left hemisphere 21.8
1855 Male, age 76, left hemisphere 20.9
Dentate gyrus
nTPM: 23.6
1927 Female, age 91, both hemispheres 26.6
2010 Male, age 76, both hemispheres 25.3
2530 Female, age 94, left hemisphere 23.6
2528 Male, age 74, both hemispheres 22.6
2246 Female, age 85, both hemispheres 22.1
2531 Female, age 67, both hemispheres 21.5
Entorhinal gyrus
nTPM: 24.0
1938 Female, age 85, left hemisphere 25.6
2764 Male, age 80, right hemisphere 24.7
1787 Male, age 76, left hemisphere 24.5
2613 Female, age 94, left hemisphere 24.4
2686 Male, age 75, right hemisphere 22.4
2117 Female, age 91, right hemisphere 22.2
Hippocampus, CA1
nTPM: 24.7
2749 Male, age 80, left hemisphere 28.9
1873 Female, age 85, both hemispheres 25.6
2045 Male, age 76, both hemispheres 24.8
2082 Female, age 91, right hemisphere 22.7
2527 Male, age 74, both hemispheres 21.6
Hippocampus, CA2
nTPM: 24.7
1892 Male, age 76, both hemispheres 27.4
2437 Female, age 94, left hemisphere 25.5
1963 Male, age 80, left hemisphere 25.1
1940 Female, age 85, left hemisphere 24.1
2249 Male, age 74, both hemispheres 23.7
2113 Female, age 91, right hemisphere 22.1
Hippocampus, CA3
nTPM: 23.1
1867 Male, age 76, both hemispheres 23.9
2137 Male, age 80, left hemisphere 23.9
1891 Female, age 85, both hemispheres 23.7
2620 Female, age 94, left hemisphere 23.4
2861 Female, age 67, both hemispheres 22.5
2436 Male, age 74, both hemispheres 21.5
Parahippocampal cortex
nTPM: 23.7
2250 Female, age 67, right hemisphere 26.4
1850 Male, age 80, both hemispheres 25.5
1990 Female, age 91, right hemisphere 24.6
1933 Female, age 85, both hemispheres 24.1
2693 Female, age 94, both hemispheres 23.6
2018 Male, age 76, both hemispheres 23.4
2245 Female, age 91, both hemispheres 23.1
2532 Female, age 72, left hemisphere 22.1
2622 Female, age 67, right hemisphere 22.1
2692 Male, age 74, both hemispheres 21.6
Perirhinal gyrus
nTPM: 25.4
1847 Female, age 91, left hemisphere 28.3
1794 Male, age 80, right hemisphere 25.9
1841 Female, age 85, right hemisphere 25.4
2521 Female, age 94, right hemisphere 25.3
2848 Male, age 76, right hemisphere 22.2
Subiculum
nTPM: 23.5
1901 Male, age 80, both hemispheres 24.8
2438 Female, age 94, left hemisphere 24.0
2729 Female, age 91, right hemisphere 23.8
1977 Female, age 85, both hemispheres 23.2
2042 Male, age 76, both hemispheres 22.9
2619 Male, age 74, both hemispheres 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 39.0
Min nTPM: 5.3
Std nTPM: 5.9
Median nTPM: 21.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 39.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 38.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 38.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 36.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 35.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 35.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 34.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.9
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 14.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.2
Sample A Female 15.9
Sample B Female 13.6
Sample C Male 10.2
Sample D Male 11.4
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 10.4
Min nTPM: 7.5
Sample A Female 9.3
Sample B Female 10.4
Sample C Male 8.2
Sample D Male 7.5
Subiculum
nTPM: 9.2
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.4
Sample A Female 9.4
Sample B Female 9.5
Sample C Male 8.4
Sample D Male 9.4
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 12.9
Min nTPM: 9.9
Sample A Female 12.3
Sample B Female 9.9
Sample C Male 12.9
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.1
Sample A Male 16.3
Sample B Male 13.6
Sample C Female 16.4
Sample D Female 12.1
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 20.3
Sample A Male 20.3
Sample B Male 23.1
Sample C Female 25.3
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
74273307 Antisense, RP_050927_02_F05, Mouse strain C57BL/6J (56 days, male) 0.8
71616137 Antisense, RP_050927_02_F05, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.