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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:77.3 nTPM
HPA:77.3 nTPM
GTEx:67.4 nTPM
FANTOM5:115.5 Scaled Tags Per Million
Pig:95.4 nTPM
Mouse:144.8 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031067
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.3
Sample id Sample description nTPM
Hippocampus
nTPM: 75.1
1898 Male, age 80, left hemisphere 93.1
1855 Male, age 76, left hemisphere 77.7
2148 Female, age 91, left hemisphere 75.4
2529 Female, age 94, left hemisphere 73.8
2621 Female, age 67, right hemisphere 67.5
1911 Female, age 85, right hemisphere 63.1
Dentate gyrus
nTPM: 74.5
2528 Male, age 74, both hemispheres 87.1
2010 Male, age 76, both hemispheres 75.7
2530 Female, age 94, left hemisphere 74.7
1927 Female, age 91, both hemispheres 74.3
2531 Female, age 67, both hemispheres 67.6
2246 Female, age 85, both hemispheres 67.3
Entorhinal gyrus
nTPM: 73.8
2764 Male, age 80, right hemisphere 89.1
2117 Female, age 91, right hemisphere 74.1
1787 Male, age 76, left hemisphere 71.2
2686 Male, age 75, right hemisphere 70.2
2613 Female, age 94, left hemisphere 69.8
1938 Female, age 85, left hemisphere 68.4
Hippocampus, CA1
nTPM: 77.3
2749 Male, age 80, left hemisphere 86.9
2527 Male, age 74, both hemispheres 83.3
1873 Female, age 85, both hemispheres 76.9
2082 Female, age 91, right hemisphere 71.9
2045 Male, age 76, both hemispheres 67.4
Hippocampus, CA2
nTPM: 72.7
1963 Male, age 80, left hemisphere 89.2
2249 Male, age 74, both hemispheres 74.0
1892 Male, age 76, both hemispheres 73.9
2113 Female, age 91, right hemisphere 69.3
2437 Female, age 94, left hemisphere 68.8
1940 Female, age 85, left hemisphere 61.1
Hippocampus, CA3
nTPM: 71.8
2620 Female, age 94, left hemisphere 89.9
2861 Female, age 67, both hemispheres 75.2
2137 Male, age 80, left hemisphere 72.7
1891 Female, age 85, both hemispheres 65.2
2436 Male, age 74, both hemispheres 65.0
1867 Male, age 76, both hemispheres 63.0
Parahippocampal cortex
nTPM: 70.5
1850 Male, age 80, both hemispheres 80.4
2622 Female, age 67, right hemisphere 79.1
2692 Male, age 74, both hemispheres 72.1
2250 Female, age 67, right hemisphere 71.7
1933 Female, age 85, both hemispheres 71.6
2693 Female, age 94, both hemispheres 69.1
1990 Female, age 91, right hemisphere 68.4
2245 Female, age 91, both hemispheres 66.7
2532 Female, age 72, left hemisphere 63.5
2018 Male, age 76, both hemispheres 62.3
Perirhinal gyrus
nTPM: 77.1
1794 Male, age 80, right hemisphere 91.4
1847 Female, age 91, left hemisphere 82.3
2521 Female, age 94, right hemisphere 71.5
2848 Male, age 76, right hemisphere 70.4
1841 Female, age 85, right hemisphere 69.8
Subiculum
nTPM: 68.2
2619 Male, age 74, both hemispheres 77.4
2729 Female, age 91, right hemisphere 76.2
1977 Female, age 85, both hemispheres 70.4
1901 Male, age 80, both hemispheres 68.6
2438 Female, age 94, left hemisphere 60.9
2042 Male, age 76, both hemispheres 56.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.4
Samples: 197

Max nTPM: 155.9
Min nTPM: 20.9
Std nTPM: 20.1
Median nTPM: 66.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 155.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 143.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 116.9
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 116.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 106.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 106.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 104.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 103.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 103.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 100.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 99.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.5
FF:10153-102I9 76 years, female 119.1
FF:10169-103B7 60 years, female 111.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 95.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 88.4
Samples: 4

Max nTPM: 105.5
Min nTPM: 71.6
Sample A Female 105.5
Sample B Female 99.8
Sample C Male 71.6
Sample D Male 76.6
Entorhinal cortex
nTPM: 86.8
Samples: 4

Max nTPM: 96.4
Min nTPM: 74.6
Sample A Female 95.1
Sample B Female 96.4
Sample C Male 81.0
Sample D Male 74.6
Subiculum
nTPM: 82.2
Samples: 4

Max nTPM: 106.0
Min nTPM: 68.4
Sample A Female 106.0
Sample B Female 70.7
Sample C Male 83.8
Sample D Male 68.4
Ventral hippocampus
nTPM: 95.4
Samples: 4

Max nTPM: 121.0
Min nTPM: 67.3
Sample A Female 104.5
Sample B Female 67.3
Sample C Male 121.0
Sample D Male 88.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 144.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.0
Samples: 4

Max nTPM: 130.9
Min nTPM: 110.1
Sample A Male 130.9
Sample B Male 110.1
Sample C Female 130.0
Sample D Female 129.0
Hippocampal formation
nTPM: 144.9
Samples: 4

Max nTPM: 154.9
Min nTPM: 133.2
Sample A Male 133.2
Sample B Male 146.1
Sample C Female 154.9
Sample D Female 145.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
227737 Antisense, RP_040609_01_C07, Mouse strain C57BL/6J (56 days, male) 13.0
276075 Antisense, RP_040609_01_C07, Mouse strain C57BL/6J (56 days, male) 12.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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