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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:35.5 nTPM
HPA:35.5 nTPM
GTEx:19.1 nTPM
FANTOM5:68.1 Scaled Tags Per Million
Pig:31.1 nTPM
Mouse:29.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020949
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
2148 Female, age 91, left hemisphere 27.9
2621 Female, age 67, right hemisphere 22.6
1911 Female, age 85, right hemisphere 20.7
1898 Male, age 80, left hemisphere 20.2
1855 Male, age 76, left hemisphere 16.9
2529 Female, age 94, left hemisphere 12.2
Dentate gyrus
nTPM: 21.4
2531 Female, age 67, both hemispheres 38.8
1927 Female, age 91, both hemispheres 27.1
2246 Female, age 85, both hemispheres 25.4
2528 Male, age 74, both hemispheres 14.9
2010 Male, age 76, both hemispheres 12.7
2530 Female, age 94, left hemisphere 9.2
Entorhinal gyrus
nTPM: 14.3
2764 Male, age 80, right hemisphere 18.4
2686 Male, age 75, right hemisphere 16.6
2613 Female, age 94, left hemisphere 16.1
1938 Female, age 85, left hemisphere 14.5
2117 Female, age 91, right hemisphere 12.3
1787 Male, age 76, left hemisphere 7.6
Hippocampus, CA1
nTPM: 23.7
2045 Male, age 76, both hemispheres 41.7
2749 Male, age 80, left hemisphere 23.9
1873 Female, age 85, both hemispheres 18.0
2082 Female, age 91, right hemisphere 17.5
2527 Male, age 74, both hemispheres 17.2
Hippocampus, CA2
nTPM: 17.1
1892 Male, age 76, both hemispheres 24.7
1940 Female, age 85, left hemisphere 22.4
2113 Female, age 91, right hemisphere 16.4
2249 Male, age 74, both hemispheres 14.8
1963 Male, age 80, left hemisphere 12.4
2437 Female, age 94, left hemisphere 12.1
Hippocampus, CA3
nTPM: 35.5
2137 Male, age 80, left hemisphere 45.7
2620 Female, age 94, left hemisphere 45.6
1867 Male, age 76, both hemispheres 41.0
2861 Female, age 67, both hemispheres 35.0
2436 Male, age 74, both hemispheres 26.2
1891 Female, age 85, both hemispheres 19.3
Parahippocampal cortex
nTPM: 18.4
2532 Female, age 72, left hemisphere 30.1
2693 Female, age 94, both hemispheres 29.2
2622 Female, age 67, right hemisphere 22.8
1850 Male, age 80, both hemispheres 18.6
2692 Male, age 74, both hemispheres 18.5
1933 Female, age 85, both hemispheres 17.5
2018 Male, age 76, both hemispheres 13.7
2250 Female, age 67, right hemisphere 13.1
2245 Female, age 91, both hemispheres 13.0
1990 Female, age 91, right hemisphere 7.8
Perirhinal gyrus
nTPM: 19.3
2521 Female, age 94, right hemisphere 28.4
1794 Male, age 80, right hemisphere 21.7
1841 Female, age 85, right hemisphere 19.1
1847 Female, age 91, left hemisphere 17.9
2848 Male, age 76, right hemisphere 9.3
Subiculum
nTPM: 19.1
1901 Male, age 80, both hemispheres 26.8
2438 Female, age 94, left hemisphere 23.5
2619 Male, age 74, both hemispheres 18.3
2729 Female, age 91, right hemisphere 17.9
2042 Male, age 76, both hemispheres 15.2
1977 Female, age 85, both hemispheres 12.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 43.1
Min nTPM: 9.8
Std nTPM: 5.5
Median nTPM: 18.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 43.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 39.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 37.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 36.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 36.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 30.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 30.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 29.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 29.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.1
FF:10153-102I9 76 years, female 78.8
FF:10169-103B7 60 years, female 57.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 20.9
Sample A Female 20.9
Sample B Female 24.5
Sample C Male 21.8
Sample D Male 25.6
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 33.6
Min nTPM: 28.4
Sample A Female 31.7
Sample B Female 30.9
Sample C Male 28.4
Sample D Male 33.6
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 24.7
Sample A Female 27.9
Sample B Female 24.7
Sample C Male 25.4
Sample D Male 24.8
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 30.7
Min nTPM: 20.8
Sample A Female 20.8
Sample B Female 24.9
Sample C Male 30.7
Sample D Male 27.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 27.0
Sample A Male 28.4
Sample B Male 28.7
Sample C Female 27.0
Sample D Female 27.5
Hippocampal formation
nTPM: 29.0
Samples: 4

Max nTPM: 33.4
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 33.4
Sample C Female 31.5
Sample D Female 27.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.