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BMP7
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.3 nTPM
HPA:36.3 nTPM
GTEx:24.1 nTPM
FANTOM5:40.8 Scaled Tags Per Million
Pig:23.8 nTPM
Mouse:6.1 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 31.5
2019 Male, age 18, unknown 47.8
2586 Male, age 75, left hemisphere 36.3
2828 Female, age 72, unknown 33.9
2411 Female, age 72, unknown 32.1
1833 Male, age 53, unknown 30.0
1830 Male, age 51, unknown 29.6
1870 Female, age 42, unknown 28.2
2219 Male, age 76, both hemispheres 27.1
1827 Male, age 72, unknown 26.9
2666 Male, age 74, left hemisphere 23.3
Dorsal raphe nucleus
nTPM: 32.2
2016 Female, age 72, unknown 36.4
2750 Male, age 76, both hemispheres 33.3
1828 Male, age 53, unknown 32.9
2298 Female, age 72, unknown 32.6
2047 Male, age 72, unknown 26.0
Inferior colliculus
nTPM: 29.0
1890 Male, age 53, unknown 29.4
2097 Female, age 72, unknown 29.1
2849 Male, age 72, unknown 29.1
1848 Female, age 42, unknown 28.5
Median raphe nucleus
nTPM: 27.2
2220 Male, age 76, midline 27.2
Pedunculopontine tegmental nucleus
nTPM: 26.7
1921 Female, age 85, both hemispheres 28.7
2334 Male, age 80, both hemispheres 28.1
2338 Male, age 61, both hemispheres 23.2
Periaquaductal grey, anterior
nTPM: 32.1
2502 Female, age 75, unknown 37.7
1795 Male, age 51, unknown 35.1
1947 Male, age 18, unknown 23.4
Periaquaductal grey, dorsal
nTPM: 33.5
2850 Male, age 76, both hemispheres 37.5
1840 Male, age 53, unknown 34.6
2464 Female, age 72, unknown 32.4
1831 Male, age 72, unknown 29.6
Periaquaductal grey, lateral
nTPM: 35.9
2272 Male, age 74, both hemispheres 40.1
2140 Male, age 76, both hemispheres 37.6
2053 Male, age 18, unknown 30.1
Pretectal area
nTPM: 36.3
2007 Male, age 72, unknown 43.1
1817 Female, age 42, unknown 42.8
2273 Male, age 74, both hemispheres 41.4
1944 Female, age 72, unknown 41.1
1815 Male, age 53, unknown 38.6
2667 Female, age 75, unknown 36.5
1816 Male, age 51, unknown 32.3
2224 Female, age 72, unknown 32.3
2316 Male, age 76, right hemisphere 32.3
2407 Male, age 75, both hemispheres 30.6
2825 Male, age 18, unknown 27.7
Red nucleus
nTPM: 35.4
2785 Male, age 18, unknown 47.2
2227 Male, age 72, unknown 38.7
2769 Male, age 72, unknown 37.4
1904 Male, age 53, unknown 35.7
1865 Male, age 51, unknown 35.6
2503 Female, age 72, unknown 35.3
2588 Male, age 74, left hemisphere 35.3
1954 Female, age 42, unknown 33.9
1821 Female, age 72, unknown 33.3
2823 Male, age 76, right hemisphere 31.7
2725 Female, age 75, unknown 31.4
2584 Male, age 75, left hemisphere 29.5
Substantia nigra
nTPM: 27.8
1889 Female, age 72, unknown 35.5
2699 Male, age 18, unknown 30.8
2583 Male, age 75, right hemisphere 30.0
2590 Female, age 75, unknown 27.8
1851 Male, age 51, unknown 27.7
1916 Female, age 42, unknown 27.1
2409 Female, age 72, unknown 26.1
2665 Male, age 74, both hemispheres 25.5
2241 Male, age 72, unknown 23.7
1941 Male, age 53, unknown 23.6
Superior colliculus
nTPM: 32.9
1995 Male, age 72, unknown 45.0
2087 Female, age 72, unknown 36.8
1913 Female, age 42, unknown 35.7
2664 Male, age 75, both hemispheres 32.8
2587 Male, age 74, left hemisphere 32.3
1796 Male, age 53, unknown 31.3
1839 Male, age 51, unknown 30.1
2261 Male, age 18, unknown 30.1
2668 Female, age 75, unknown 29.1
1895 Male, age 76, right hemisphere 25.8
Ventral tegmental area
nTPM: 28.4
2410 Female, age 72, unknown 31.6
1942 Male, age 51, unknown 30.2
2021 Male, age 53, unknown 30.1
2223 Female, age 72, unknown 27.2
2218 Male, age 76, both hemispheres 26.0
1915 Female, age 42, unknown 25.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 24.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 24.1
Samples: 139

Max nTPM: 65.8
Min nTPM: 5.4
Std nTPM: 8.2
Median nTPM: 23.1
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 65.8
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 44.6
GTEX-11UD1-0011-R2b-SM-5BC6O 40-49 years, female 43.5
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 40.3
GTEX-15EO6-0011-R2a-SM-6M46R 50-59 years, male 38.6
GTEX-13CF2-0011-R2a-SM-5L3DC 60-69 years, male 38.4
GTEX-1H3O1-0011-R2b-SM-CKZOT 60-69 years, male 37.5
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 36.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 36.7
GTEX-17HG3-0011-R2a-SM-7MGVX 30-39 years, female 35.9
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 34.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 40.8
FF:10158-103A5 76 years, female 40.8

MIDBRAIN - Pig RNA-seqi
Average nTPM 23.8
Pig sample Sample description nTPM
Midbrain
nTPM: 17.9
Samples: 4

Max nTPM: 33.4
Min nTPM: 4.8
Sample A Female 33.4
Sample B Female 7.6
Sample C Male 25.9
Sample D Male 4.8
Periaqueductal gray
nTPM: 5.2
Samples: 3

Max nTPM: 6.4
Min nTPM: 4.4
Sample B Female 6.4
Sample C Male 4.4
Sample D Male 4.8
Substantia nigra
nTPM: 9.7
Samples: 4

Max nTPM: 14.8
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 9.2
Sample C Male 8.0
Sample D Male 14.8
Superior colliculi
nTPM: 23.8
Samples: 4

Max nTPM: 37.9
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 37.9
Sample C Male 30.9
Sample D Male 13.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 6.1
Mouse sample Sample description nTPM
Midbrain
nTPM: 6.2
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.1
Sample A Male 6.5
Sample B Male 5.7
Sample C Female 7.3
Sample D Female 5.1

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
2066 Antisense, RP_040526_01_A02, Mouse strain C57BL/6J (56 days, male) 0.2
70795430 Antisense, RP_050712_01_E09, Mouse strain C57BL/6J (56 days, male) 0.1
2065 Antisense, RP_040526_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.