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SAMHD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.4 nTPM
HPA:11.4 nTPM
GTEx:14.1 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:8.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047072
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1911 Female, age 85, right hemisphere 11.8
2621 Female, age 67, right hemisphere 10.6
1898 Male, age 80, left hemisphere 10.4
1855 Male, age 76, left hemisphere 10.1
2529 Female, age 94, left hemisphere 9.8
2148 Female, age 91, left hemisphere 9.4
Dentate gyrus
nTPM: 9.7
2530 Female, age 94, left hemisphere 10.2
2010 Male, age 76, both hemispheres 9.8
2528 Male, age 74, both hemispheres 9.8
2246 Female, age 85, both hemispheres 9.6
1927 Female, age 91, both hemispheres 9.4
2531 Female, age 67, both hemispheres 9.0
Entorhinal gyrus
nTPM: 9.1
2117 Female, age 91, right hemisphere 11.0
1787 Male, age 76, left hemisphere 9.7
1938 Female, age 85, left hemisphere 9.7
2613 Female, age 94, left hemisphere 8.4
2764 Male, age 80, right hemisphere 8.2
2686 Male, age 75, right hemisphere 7.4
Hippocampus, CA1
nTPM: 10.3
2082 Female, age 91, right hemisphere 11.9
2527 Male, age 74, both hemispheres 10.8
1873 Female, age 85, both hemispheres 10.3
2045 Male, age 76, both hemispheres 9.4
2749 Male, age 80, left hemisphere 9.2
Hippocampus, CA2
nTPM: 11.4
1940 Female, age 85, left hemisphere 13.1
1892 Male, age 76, both hemispheres 12.2
2113 Female, age 91, right hemisphere 11.7
2249 Male, age 74, both hemispheres 11.1
2437 Female, age 94, left hemisphere 10.9
1963 Male, age 80, left hemisphere 9.3
Hippocampus, CA3
nTPM: 10.3
1867 Male, age 76, both hemispheres 13.2
2436 Male, age 74, both hemispheres 12.1
1891 Female, age 85, both hemispheres 10.8
2137 Male, age 80, left hemisphere 9.3
2861 Female, age 67, both hemispheres 8.9
2620 Female, age 94, left hemisphere 7.7
Parahippocampal cortex
nTPM: 9.2
2250 Female, age 67, right hemisphere 12.2
1990 Female, age 91, right hemisphere 9.6
2692 Male, age 74, both hemispheres 9.4
1933 Female, age 85, both hemispheres 9.0
2018 Male, age 76, both hemispheres 9.0
2245 Female, age 91, both hemispheres 9.0
2532 Female, age 72, left hemisphere 8.9
2693 Female, age 94, both hemispheres 8.9
1850 Male, age 80, both hemispheres 8.4
2622 Female, age 67, right hemisphere 7.9
Perirhinal gyrus
nTPM: 8.6
2521 Female, age 94, right hemisphere 9.5
1841 Female, age 85, right hemisphere 8.9
2848 Male, age 76, right hemisphere 8.6
1847 Female, age 91, left hemisphere 8.3
1794 Male, age 80, right hemisphere 7.9
Subiculum
nTPM: 10.6
2042 Male, age 76, both hemispheres 12.8
2729 Female, age 91, right hemisphere 11.3
2619 Male, age 74, both hemispheres 10.9
1901 Male, age 80, both hemispheres 10.6
1977 Female, age 85, both hemispheres 9.1
2438 Female, age 94, left hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 41.2
Min nTPM: 6.0
Std nTPM: 6.7
Median nTPM: 11.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 41.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 37.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 36.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 35.4
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 34.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 31.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 31.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 30.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 29.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 28.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 27.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10153-102I9 76 years, female 61.7
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.5
Sample A Female 9.0
Sample B Female 9.7
Sample C Male 8.5
Sample D Male 9.2
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.9
Sample A Female 10.6
Sample B Female 10.7
Sample C Male 11.1
Sample D Male 9.9
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.9
Sample A Female 11.1
Sample B Female 9.9
Sample C Male 10.4
Sample D Male 10.6
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.2
Sample A Female 10.6
Sample B Female 9.4
Sample C Male 12.3
Sample D Male 9.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.6
Sample A Male 8.2
Sample B Male 7.6
Sample C Female 8.7
Sample D Female 8.1
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.5
Sample A Male 7.8
Sample B Male 8.7
Sample C Female 7.6
Sample D Female 7.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75694483 Antisense, RP_060518_03_G12, Mouse strain C57BL/6J (56 days, male) 0.5

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