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MAP1LC3A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:123.7 nTPM
HPA:123.7 nTPM
GTEx:120.5 nTPM
FANTOM5:253.4 Scaled Tags Per Million
Pig:116.4 nTPM
Mouse:41.8 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007649Antibody HPA052474Antibody HPA052484Antibody CAB037174
Glial cells Not detectedNot detectedLowNot detected
Neuronal cells MediumHighHighHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.7
Sample id Sample description nTPM
Hippocampus
nTPM: 109.8
1898 Male, age 80, left hemisphere 131.4
2621 Female, age 67, right hemisphere 123.5
1855 Male, age 76, left hemisphere 108.7
2148 Female, age 91, left hemisphere 100.1
2529 Female, age 94, left hemisphere 98.0
1911 Female, age 85, right hemisphere 97.1
Dentate gyrus
nTPM: 114.1
2530 Female, age 94, left hemisphere 140.5
1927 Female, age 91, both hemispheres 128.0
2010 Male, age 76, both hemispheres 119.0
2246 Female, age 85, both hemispheres 103.9
2531 Female, age 67, both hemispheres 100.4
2528 Male, age 74, both hemispheres 92.7
Entorhinal gyrus
nTPM: 123.7
2613 Female, age 94, left hemisphere 150.1
2764 Male, age 80, right hemisphere 144.1
1938 Female, age 85, left hemisphere 122.3
1787 Male, age 76, left hemisphere 121.9
2686 Male, age 75, right hemisphere 114.2
2117 Female, age 91, right hemisphere 89.8
Hippocampus, CA1
nTPM: 122.1
2749 Male, age 80, left hemisphere 199.0
1873 Female, age 85, both hemispheres 115.7
2527 Male, age 74, both hemispheres 101.3
2045 Male, age 76, both hemispheres 98.8
2082 Female, age 91, right hemisphere 95.6
Hippocampus, CA2
nTPM: 110.6
1892 Male, age 76, both hemispheres 141.4
1963 Male, age 80, left hemisphere 130.9
2437 Female, age 94, left hemisphere 120.3
2249 Male, age 74, both hemispheres 95.2
1940 Female, age 85, left hemisphere 88.6
2113 Female, age 91, right hemisphere 87.4
Hippocampus, CA3
nTPM: 118.9
2137 Male, age 80, left hemisphere 154.8
1867 Male, age 76, both hemispheres 128.5
2620 Female, age 94, left hemisphere 122.5
2861 Female, age 67, both hemispheres 117.8
1891 Female, age 85, both hemispheres 96.4
2436 Male, age 74, both hemispheres 93.8
Parahippocampal cortex
nTPM: 115.8
2245 Female, age 91, both hemispheres 131.3
1990 Female, age 91, right hemisphere 124.7
1850 Male, age 80, both hemispheres 123.5
2622 Female, age 67, right hemisphere 121.4
2532 Female, age 72, left hemisphere 115.8
1933 Female, age 85, both hemispheres 113.7
2250 Female, age 67, right hemisphere 113.1
2693 Female, age 94, both hemispheres 106.7
2018 Male, age 76, both hemispheres 104.2
2692 Male, age 74, both hemispheres 103.5
Perirhinal gyrus
nTPM: 122.3
1847 Female, age 91, left hemisphere 149.3
1794 Male, age 80, right hemisphere 130.0
2521 Female, age 94, right hemisphere 117.9
1841 Female, age 85, right hemisphere 109.8
2848 Male, age 76, right hemisphere 104.3
Subiculum
nTPM: 108.3
1901 Male, age 80, both hemispheres 127.4
1977 Female, age 85, both hemispheres 124.7
2619 Male, age 74, both hemispheres 110.7
2042 Male, age 76, both hemispheres 108.0
2438 Female, age 94, left hemisphere 99.2
2729 Female, age 91, right hemisphere 79.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 120.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.5
Samples: 197

Max nTPM: 270.6
Min nTPM: 34.4
Std nTPM: 48.8
Median nTPM: 108.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 270.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 255.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 253.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 228.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 226.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 224.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 219.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 214.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 213.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 212.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 211.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 253.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 253.4
FF:10169-103B7 60 years, female 305.5
FF:10153-102I9 76 years, female 201.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 116.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 116.4
Samples: 4

Max nTPM: 170.8
Min nTPM: 73.3
Sample A Female 170.8
Sample B Female 104.8
Sample C Male 116.7
Sample D Male 73.3
Entorhinal cortex
nTPM: 107.4
Samples: 4

Max nTPM: 120.6
Min nTPM: 91.1
Sample A Female 110.8
Sample B Female 107.0
Sample C Male 120.6
Sample D Male 91.1
Subiculum
nTPM: 111.8
Samples: 4

Max nTPM: 162.8
Min nTPM: 89.9
Sample A Female 162.8
Sample B Female 97.9
Sample C Male 96.4
Sample D Male 89.9
Ventral hippocampus
nTPM: 100.8
Samples: 4

Max nTPM: 130.8
Min nTPM: 69.4
Sample A Female 104.2
Sample B Female 69.4
Sample C Male 130.8
Sample D Male 98.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 48.4
Min nTPM: 38.0
Sample A Male 38.0
Sample B Male 42.3
Sample C Female 38.5
Sample D Female 48.4
Hippocampal formation
nTPM: 35.5
Samples: 4

Max nTPM: 41.7
Min nTPM: 31.3
Sample A Male 36.3
Sample B Male 32.7
Sample C Female 31.3
Sample D Female 41.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69751973 Antisense, RP_050503_04_H01, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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