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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		76.711
RNA expressioni
Consensus:9.4 nTPM
HPA:9.4 nTPM
GTEx:8.7 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:7.1 nTPM
Mouse:18.0 nTPM
Allen mouse:4.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA000229
Amygdala mean intensity 76.711
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 76.711
Basal medial amygdaloid nucleus 19.330
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 15.880
Cortical amygdala 41.276
Central amygdala 13.190
Medial amygdaloid nucleus 35.197

AMYGDALA - HPA Brain RNA-seq
Max nTPM 9.4
Sample id Sample description nTPM
Amygdala
nTPM: 8.8
2514 Male, age 75, right hemisphere 9.2
2517 Female, age 94, left hemisphere 9.0
2814 Male, age 76, right hemisphere 8.9
1987 Female, age 91, left hemisphere 8.5
2695 Female, age 67, right hemisphere 8.5
Basal amygdala
nTPM: 9.2
2110 Male, age 80, left hemisphere 9.8
2685 Female, age 94, left hemisphere 9.5
2827 Female, age 67, right hemisphere 9.5
2609 Male, age 75, right hemisphere 8.9
1955 Male, age 76, both hemispheres 8.8
2243 Female, age 91, right hemisphere 8.6
Central amygdala
nTPM: 9.1
2826 Female, age 94, left hemisphere 9.9
2239 Male, age 80, left hemisphere 9.3
2515 Male, age 75, right hemisphere 9.0
1905 Male, age 76, both hemispheres 8.8
2701 Female, age 91, right hemisphere 8.7
Corticomedial amygdala
nTPM: 9.0
2829 Male, age 80, left hemisphere 9.7
2429 Female, age 94, left hemisphere 9.5
2428 Male, age 75, right hemisphere 9.3
2242 Female, age 91, right hemisphere 9.2
2535 Female, age 67, right hemisphere 9.0
2240 Male, age 76, both hemispheres 7.6
Lateral amygdala
nTPM: 9.4
2830 Female, age 67, right hemisphere 9.8
2256 Male, age 80, left hemisphere 9.7
2534 Female, age 94, left hemisphere 9.7
2255 Female, age 91, right hemisphere 9.4
2516 Male, age 75, right hemisphere 9.0
1883 Male, age 76, both hemispheres 8.9
Stria terminalis, bed nucleus
nTPM: 8.8
1974 Female, age 91, both hemispheres 9.2
2486 Female, age 94, both hemispheres 9.0
2201 Male, age 74, unknown 8.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 8.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 8.7
Samples: 152

Max nTPM: 12.8
Min nTPM: 5.7
Std nTPM: 1.4
Median nTPM: 8.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 12.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 12.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 11.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 11.7
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 11.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 11.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 11.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 11.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 10.9
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 10.9
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 10.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 19.7
FF:10151-102I7 76 years, female 19.7

AMYGDALA - Pig RNA-seqi
Average nTPM 7.1
Pig sample Sample description nTPM
Amygdala
nTPM: 7.1
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.8
Sample A Female 7.4
Sample B Female 7.3
Sample C Male 6.9
Sample D Male 6.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 18.0
Samples: 4

Max nTPM: 20.0
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 20.0
Sample C Female 18.5
Sample D Female 17.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.3
68301951 Antisense, RP_041130_02_B05, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.