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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA068379
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 329.9
Min nTPM: 43.3
Std nTPM: 40.5
Median nTPM:
218_1
71 years, female
329.9
237_1
82 years, male
231.6
172_1
72 years, female
215.4
394_1
75 years, female
197.8
375_1
74 years, female
191.6
354_1
81 years, female
183.8
35_1
74 years, female
183.6
350_1
84 years, female
178.6
42_1
85 years, male
178.2
355_1
70 years, female
176.0
335_1
73 years, female
173.9
356_1
87 years, female
169.9
352_1
62 years, male
168.7
286_1
68 years, female
168.3
264_1
73 years, female
166.7
506_1
65 years, male
162.1
99_1
64 years, male
160.3
376_1
75 years, female
158.6
349_1
83 years, male
156.2
319_1
81 years, male
156.1
389_1
86 years, female
154.3
6_1
73 years, female
153.6
243_1
75 years, male
153.4
137_1
83 years, male
151.6
347_1
72 years, male
150.3
320_1
89 years, female
146.9
353_1
82 years, female
146.6
499_1
55 years, female
141.0
452_1
88 years, female
139.8
318_1
68 years, male
139.2
173_1
67 years, male
137.2
379_1
60 years, male
137.1
503_1
68 years, male
136.8
4_1
88 years, female
136.7
293_1
68 years, female
135.1
351_1
91 years, male
134.6
317_1
60 years, male
133.4
425_1
59 years, female
133.3
117_1
61 years, male
132.5
163_1
78 years, male
132.1
386_1
76 years, male
131.1
153_1
70 years, female
130.8
9_1
66 years, female
129.9
313_1
79 years, female
129.7
404_1
82 years, female
128.6
119_1
70 years, female
128.1
115_1
83 years, male
127.8
447_1
81 years, male
127.0
109_1
81 years, female
126.6
406_1
79 years, male
126.3
142_1
61 years, female
125.7
229_1
69 years, female
125.6
41_1
94 years, female
125.4
321_1
62 years, female
123.3
377_1
82 years, female
121.3
307_1
66 years, female
117.4
162_1
79 years, female
115.2
295_1
61 years, female
115.0
384_1
83 years, male
113.8
177_1
74 years, male
112.6
316_1
62 years, male
112.6
291_1
76 years, male
112.4
120_1
70 years, female
112.3
217_1
76 years, male
111.9
518_1
75 years, female
111.8
266_1
85 years, male
109.8
405_1
91 years, male
109.3
324_1
76 years, male
108.7
526_1
61 years, male
107.7
43_1
64 years, female
107.6
517_1
88 years, male
107.5
145_1
84 years, male
107.0
292_1
71 years, male
107.0
311_1
78 years, male
103.2
288_1
66 years, female
102.6
189_1
76 years, male
100.8
246_1
77 years, male
99.8
468_1
89 years, male
99.1
254_1
77 years, female
98.7
396_1
62 years, male
97.9
480_1
63 years, male
97.9
126_1
63 years, male
97.4
348_1
84 years, male
95.5
265_1
87 years, male
95.1
308_1
70 years, female
94.5
32_1
67 years, male
94.3
315_1
62 years, female
92.2
251_1
78 years, male
91.6
18_1
88 years, male
91.4
314_1
67 years, male
91.0
415_1
77 years, female
90.8
322_1
76 years, male
90.5
2_1
77 years, female
86.1
81_1
67 years, male
85.2
414_1
84 years, female
82.5
466_1
57 years, female
81.3
17_1
71 years, male
75.9
490_1
67 years, female
75.8
139_1
64 years, female
73.7
495_1
57 years, female
72.2
89_1
63 years, male
62.7
149_1
88 years, male
58.4
501_1
88 years, male
48.5
413_1
59 years, female
45.3
491_1
89 years, female
43.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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