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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:30.7 nTPM
HPA:30.7 nTPM
GTEx:33.2 nTPM
FANTOM5:57.0 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:193.6 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020433
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.3
1898 Male, age 80, left hemisphere 31.0
2529 Female, age 94, left hemisphere 30.4
1911 Female, age 85, right hemisphere 30.2
1855 Male, age 76, left hemisphere 29.4
2621 Female, age 67, right hemisphere 26.5
2148 Female, age 91, left hemisphere 22.2
Dentate gyrus
nTPM: 28.6
2010 Male, age 76, both hemispheres 34.9
2528 Male, age 74, both hemispheres 32.9
2530 Female, age 94, left hemisphere 31.1
2531 Female, age 67, both hemispheres 25.3
2246 Female, age 85, both hemispheres 25.2
1927 Female, age 91, both hemispheres 22.2
Entorhinal gyrus
nTPM: 28.4
1787 Male, age 76, left hemisphere 31.3
2117 Female, age 91, right hemisphere 30.2
1938 Female, age 85, left hemisphere 29.5
2764 Male, age 80, right hemisphere 28.5
2613 Female, age 94, left hemisphere 26.2
2686 Male, age 75, right hemisphere 24.7
Hippocampus, CA1
nTPM: 27.3
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 28.5
2082 Female, age 91, right hemisphere 28.4
2045 Male, age 76, both hemispheres 27.5
2749 Male, age 80, left hemisphere 23.5
Hippocampus, CA2
nTPM: 29.2
2249 Male, age 74, both hemispheres 32.7
2437 Female, age 94, left hemisphere 30.9
1940 Female, age 85, left hemisphere 29.2
2113 Female, age 91, right hemisphere 28.1
1892 Male, age 76, both hemispheres 27.4
1963 Male, age 80, left hemisphere 27.2
Hippocampus, CA3
nTPM: 26.1
1867 Male, age 76, both hemispheres 33.3
1891 Female, age 85, both hemispheres 30.6
2137 Male, age 80, left hemisphere 26.2
2436 Male, age 74, both hemispheres 23.8
2861 Female, age 67, both hemispheres 22.1
2620 Female, age 94, left hemisphere 20.8
Parahippocampal cortex
nTPM: 30.1
2018 Male, age 76, both hemispheres 39.1
1850 Male, age 80, both hemispheres 34.2
1933 Female, age 85, both hemispheres 33.6
1990 Female, age 91, right hemisphere 30.6
2245 Female, age 91, both hemispheres 30.2
2532 Female, age 72, left hemisphere 28.8
2250 Female, age 67, right hemisphere 28.2
2692 Male, age 74, both hemispheres 28.2
2693 Female, age 94, both hemispheres 25.7
2622 Female, age 67, right hemisphere 22.1
Perirhinal gyrus
nTPM: 30.7
1847 Female, age 91, left hemisphere 35.5
1841 Female, age 85, right hemisphere 33.1
1794 Male, age 80, right hemisphere 31.8
2521 Female, age 94, right hemisphere 28.9
2848 Male, age 76, right hemisphere 24.5
Subiculum
nTPM: 30.4
2042 Male, age 76, both hemispheres 35.4
1977 Female, age 85, both hemispheres 30.4
2438 Female, age 94, left hemisphere 30.4
1901 Male, age 80, both hemispheres 29.9
2619 Male, age 74, both hemispheres 28.6
2729 Female, age 91, right hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 61.5
Min nTPM: 12.9
Std nTPM: 9.2
Median nTPM: 31.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 61.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 61.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 55.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 54.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 54.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 51.3
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 50.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 50.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 50.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 49.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.0
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 47.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 57.9
Min nTPM: 26.4
Sample A Female 57.9
Sample B Female 41.5
Sample C Male 45.8
Sample D Male 26.4
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 15.9
Sample A Female 20.7
Sample B Female 23.2
Sample C Male 20.6
Sample D Male 15.9
Subiculum
nTPM: 30.3
Samples: 4

Max nTPM: 37.3
Min nTPM: 25.2
Sample A Female 37.3
Sample B Female 25.2
Sample C Male 33.6
Sample D Male 25.2
Ventral hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 53.5
Min nTPM: 22.3
Sample A Female 34.8
Sample B Female 22.3
Sample C Male 26.9
Sample D Male 53.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 193.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 156.8
Samples: 4

Max nTPM: 203.7
Min nTPM: 124.2
Sample A Male 131.9
Sample B Male 124.2
Sample C Female 167.5
Sample D Female 203.7
Hippocampal formation
nTPM: 193.6
Samples: 4

Max nTPM: 219.2
Min nTPM: 168.1
Sample A Male 173.2
Sample B Male 214.0
Sample C Female 219.2
Sample D Female 168.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
68269036 Antisense, RP_041208_01_E11, Mouse strain C57BL/6J (56 days, male) 10.7
355886 Antisense, RP_040617_01_F04, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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