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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA059546
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
Low
Inner nuclear layer
Not detected
Inner plexiform layer
Low
Ganglion cells
Low
Nerve fiber layer
Medium
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 338.2
Min nTPM: 108.3
Std nTPM: 52.5
Median nTPM:
6_1
73 years, female
338.2
415_1
77 years, female
328.9
389_1
86 years, female
328.1
425_1
59 years, female
324.3
375_1
74 years, female
321.0
377_1
82 years, female
316.0
335_1
73 years, female
308.1
414_1
84 years, female
308.1
35_1
74 years, female
292.7
229_1
69 years, female
286.7
246_1
77 years, male
283.0
321_1
62 years, female
279.6
9_1
66 years, female
279.0
153_1
70 years, female
278.5
254_1
77 years, female
273.6
376_1
75 years, female
272.5
172_1
72 years, female
270.7
218_1
71 years, female
264.8
350_1
84 years, female
264.1
518_1
75 years, female
262.1
413_1
59 years, female
260.5
293_1
68 years, female
257.6
355_1
70 years, female
256.0
466_1
57 years, female
247.8
162_1
79 years, female
246.1
468_1
89 years, male
244.8
490_1
67 years, female
241.9
354_1
81 years, female
238.7
499_1
55 years, female
238.3
126_1
63 years, male
237.7
237_1
82 years, male
237.2
43_1
64 years, female
234.4
217_1
76 years, male
233.1
243_1
75 years, male
231.3
313_1
79 years, female
229.6
115_1
83 years, male
229.3
356_1
87 years, female
228.4
315_1
62 years, female
228.3
320_1
89 years, female
228.3
163_1
78 years, male
227.7
353_1
82 years, female
225.5
316_1
62 years, male
225.1
319_1
81 years, male
224.9
251_1
78 years, male
223.8
139_1
64 years, female
221.5
109_1
81 years, female
220.9
286_1
68 years, female
219.0
347_1
72 years, male
219.0
4_1
88 years, female
218.8
394_1
75 years, female
218.4
405_1
91 years, male
218.2
142_1
61 years, female
217.7
404_1
82 years, female
215.8
526_1
61 years, male
214.6
177_1
74 years, male
213.8
406_1
79 years, male
210.3
503_1
68 years, male
209.9
265_1
87 years, male
209.1
266_1
85 years, male
207.9
189_1
76 years, male
207.2
18_1
88 years, male
204.6
324_1
76 years, male
204.6
292_1
71 years, male
197.5
307_1
66 years, female
197.5
120_1
70 years, female
195.8
352_1
62 years, male
195.1
288_1
66 years, female
191.7
318_1
68 years, male
187.7
386_1
76 years, male
187.6
81_1
67 years, male
186.2
117_1
61 years, male
183.3
119_1
70 years, female
180.6
41_1
94 years, female
178.8
517_1
88 years, male
177.3
447_1
81 years, male
175.8
149_1
88 years, male
175.0
322_1
76 years, male
174.7
137_1
83 years, male
174.5
145_1
84 years, male
174.4
32_1
67 years, male
174.3
99_1
64 years, male
174.2
349_1
83 years, male
172.0
311_1
78 years, male
170.8
17_1
71 years, male
170.7
495_1
57 years, female
167.9
264_1
73 years, female
167.5
291_1
76 years, male
166.7
480_1
63 years, male
165.4
2_1
77 years, female
164.5
384_1
83 years, male
162.5
396_1
62 years, male
158.8
379_1
60 years, male
156.7
89_1
63 years, male
151.6
295_1
61 years, female
149.9
491_1
89 years, female
148.1
351_1
91 years, male
146.8
452_1
88 years, female
142.9
348_1
84 years, male
138.2
173_1
67 years, male
132.6
42_1
85 years, male
130.7
317_1
60 years, male
120.9
314_1
67 years, male
118.9
308_1
70 years, female
117.0
501_1
88 years, male
115.3
506_1
65 years, male
108.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.