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UBL4A
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.7 nTPM
HPA:29.7 nTPM
GTEx:20.7 nTPM
FANTOM5:10.3 Scaled Tags Per Million
Mouse:46.6 nTPM
Allen mouse:1.6 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 29.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 29.0
2586 Male, age 75, left hemisphere 34.2
2019 Male, age 18, unknown 31.7
1827 Male, age 72, unknown 29.9
2666 Male, age 74, left hemisphere 29.5
2828 Female, age 72, unknown 28.8
2411 Female, age 72, unknown 27.9
1870 Female, age 42, unknown 27.4
2219 Male, age 76, both hemispheres 27.2
1830 Male, age 51, unknown 26.9
1833 Male, age 53, unknown 26.7
Dorsal raphe nucleus
nTPM: 27.8
1828 Male, age 53, unknown 28.6
2047 Male, age 72, unknown 28.1
2298 Female, age 72, unknown 28.0
2750 Male, age 76, both hemispheres 27.7
2016 Female, age 72, unknown 26.6
Inferior colliculus
nTPM: 28.7
2097 Female, age 72, unknown 29.4
1848 Female, age 42, unknown 28.9
1890 Male, age 53, unknown 28.7
2849 Male, age 72, unknown 28.0
Median raphe nucleus
nTPM: 26.2
2220 Male, age 76, midline 26.2
Pedunculopontine tegmental nucleus
nTPM: 27.4
2334 Male, age 80, both hemispheres 28.2
1921 Female, age 85, both hemispheres 28.0
2338 Male, age 61, both hemispheres 25.9
Periaquaductal grey, anterior
nTPM: 29.0
1795 Male, age 51, unknown 29.2
1947 Male, age 18, unknown 28.8
2502 Female, age 75, unknown 28.8
Periaquaductal grey, dorsal
nTPM: 26.6
2464 Female, age 72, unknown 28.0
1840 Male, age 53, unknown 26.9
1831 Male, age 72, unknown 26.3
2850 Male, age 76, both hemispheres 25.2
Periaquaductal grey, lateral
nTPM: 25.4
2053 Male, age 18, unknown 26.5
2272 Male, age 74, both hemispheres 25.0
2140 Male, age 76, both hemispheres 24.9
Pretectal area
nTPM: 29.7
2007 Male, age 72, unknown 33.3
1816 Male, age 51, unknown 33.1
1817 Female, age 42, unknown 32.9
1944 Female, age 72, unknown 32.2
1815 Male, age 53, unknown 30.4
2407 Male, age 75, both hemispheres 29.2
2667 Female, age 75, unknown 28.1
2825 Male, age 18, unknown 27.4
2316 Male, age 76, right hemisphere 27.0
2224 Female, age 72, unknown 26.4
2273 Male, age 74, both hemispheres 26.0
Red nucleus
nTPM: 28.6
2785 Male, age 18, unknown 31.2
2584 Male, age 75, left hemisphere 30.8
2588 Male, age 74, left hemisphere 28.9
2725 Female, age 75, unknown 28.9
2769 Male, age 72, unknown 28.6
1821 Female, age 72, unknown 28.5
1954 Female, age 42, unknown 28.1
2227 Male, age 72, unknown 28.1
2503 Female, age 72, unknown 28.1
1865 Male, age 51, unknown 27.7
2823 Male, age 76, right hemisphere 27.5
1904 Male, age 53, unknown 27.4
Substantia nigra
nTPM: 28.4
2583 Male, age 75, right hemisphere 31.6
1889 Female, age 72, unknown 31.1
1941 Male, age 53, unknown 30.6
2665 Male, age 74, both hemispheres 28.8
1851 Male, age 51, unknown 28.6
1916 Female, age 42, unknown 28.5
2590 Female, age 75, unknown 27.8
2241 Male, age 72, unknown 26.7
2409 Female, age 72, unknown 25.2
2699 Male, age 18, unknown 24.9
Superior colliculus
nTPM: 29.1
2664 Male, age 75, both hemispheres 31.5
2668 Female, age 75, unknown 30.6
2087 Female, age 72, unknown 30.3
1796 Male, age 53, unknown 29.0
2261 Male, age 18, unknown 29.0
1895 Male, age 76, right hemisphere 28.9
1839 Male, age 51, unknown 28.6
2587 Male, age 74, left hemisphere 28.0
1995 Male, age 72, unknown 27.7
1913 Female, age 42, unknown 27.6
Ventral tegmental area
nTPM: 27.6
1915 Female, age 42, unknown 28.3
2223 Female, age 72, unknown 28.1
2410 Female, age 72, unknown 28.1
1942 Male, age 51, unknown 27.3
2218 Male, age 76, both hemispheres 27.1
2021 Male, age 53, unknown 26.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 20.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 20.7
Samples: 139

Max nTPM: 40.2
Min nTPM: 12.7
Std nTPM: 3.8
Median nTPM: 20.3
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 40.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 32.8
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 32.5
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 30.8
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 29.2
GTEX-11PRG-0011-R2a-SM-69LQ5 50-59 years, male 27.2
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 26.8
GTEX-13CF2-0011-R2a-SM-5L3DC 60-69 years, male 26.2
GTEX-1GMR8-0011-R2a-SM-CE6RD 50-59 years, female 26.2
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 26.2
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 25.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 10.3
FF:10158-103A5 76 years, female 10.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 46.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 46.6
Samples: 4

Max nTPM: 49.3
Min nTPM: 44.0
Sample A Male 45.5
Sample B Male 44.0
Sample C Female 47.6
Sample D Female 49.3

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.6
75774670 Antisense, RP_060530_01_C07, Mouse strain C57BL/6J (56 days, male) 3.9
393217 Antisense, RP_040804_02_E07, Mouse strain C57BL/6J (56 days, male) 0.8
70813365 Antisense, RP_050712_03_G10, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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