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RBM3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.0 nTPM
HPA:24.0 nTPM
GTEx:50.4 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:0.6 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 22.1
1870 Female, age 42, unknown 23.6
2019 Male, age 18, unknown 23.6
1833 Male, age 53, unknown 22.6
1827 Male, age 72, unknown 22.5
2411 Female, age 72, unknown 21.9
1830 Male, age 51, unknown 21.6
2586 Male, age 75, left hemisphere 21.6
2828 Female, age 72, unknown 21.3
2219 Male, age 76, both hemispheres 21.2
2666 Male, age 74, left hemisphere 20.9
Dorsal raphe nucleus
nTPM: 22.2
2047 Male, age 72, unknown 24.0
2750 Male, age 76, both hemispheres 23.3
1828 Male, age 53, unknown 22.5
2298 Female, age 72, unknown 20.7
2016 Female, age 72, unknown 20.6
Inferior colliculus
nTPM: 21.5
2097 Female, age 72, unknown 23.3
1890 Male, age 53, unknown 21.7
1848 Female, age 42, unknown 21.3
2849 Male, age 72, unknown 19.6
Median raphe nucleus
nTPM: 24.0
2220 Male, age 76, midline 24.0
Pedunculopontine tegmental nucleus
nTPM: 22.6
2338 Male, age 61, both hemispheres 23.5
2334 Male, age 80, both hemispheres 23.1
1921 Female, age 85, both hemispheres 21.3
Periaquaductal grey, anterior
nTPM: 21.3
1947 Male, age 18, unknown 23.2
1795 Male, age 51, unknown 20.3
2502 Female, age 75, unknown 20.3
Periaquaductal grey, dorsal
nTPM: 20.5
2850 Male, age 76, both hemispheres 21.4
1831 Male, age 72, unknown 21.3
2464 Female, age 72, unknown 20.7
1840 Male, age 53, unknown 18.4
Periaquaductal grey, lateral
nTPM: 20.9
2140 Male, age 76, both hemispheres 21.6
2272 Male, age 74, both hemispheres 21.2
2053 Male, age 18, unknown 20.0
Pretectal area
nTPM: 22.6
2667 Female, age 75, unknown 24.7
2407 Male, age 75, both hemispheres 23.7
1816 Male, age 51, unknown 23.5
1944 Female, age 72, unknown 23.2
2316 Male, age 76, right hemisphere 23.0
1815 Male, age 53, unknown 22.5
2007 Male, age 72, unknown 22.3
2273 Male, age 74, both hemispheres 22.1
1817 Female, age 42, unknown 22.0
2825 Male, age 18, unknown 21.1
2224 Female, age 72, unknown 20.5
Red nucleus
nTPM: 22.5
1865 Male, age 51, unknown 24.2
2823 Male, age 76, right hemisphere 23.6
1904 Male, age 53, unknown 23.4
2588 Male, age 74, left hemisphere 22.9
1821 Female, age 72, unknown 22.6
2227 Male, age 72, unknown 22.4
2584 Male, age 75, left hemisphere 22.3
2503 Female, age 72, unknown 22.2
1954 Female, age 42, unknown 22.0
2769 Male, age 72, unknown 21.9
2785 Male, age 18, unknown 21.8
2725 Female, age 75, unknown 21.2
Substantia nigra
nTPM: 23.8
1851 Male, age 51, unknown 25.8
2583 Male, age 75, right hemisphere 24.9
2409 Female, age 72, unknown 24.7
1941 Male, age 53, unknown 24.4
2241 Male, age 72, unknown 24.2
1916 Female, age 42, unknown 23.8
2590 Female, age 75, unknown 23.2
2665 Male, age 74, both hemispheres 22.8
2699 Male, age 18, unknown 22.5
1889 Female, age 72, unknown 21.3
Superior colliculus
nTPM: 21.8
2087 Female, age 72, unknown 24.3
1913 Female, age 42, unknown 23.1
2261 Male, age 18, unknown 22.7
2668 Female, age 75, unknown 22.6
2587 Male, age 74, left hemisphere 22.0
1895 Male, age 76, right hemisphere 21.3
1796 Male, age 53, unknown 21.2
1995 Male, age 72, unknown 21.2
2664 Male, age 75, both hemispheres 21.0
1839 Male, age 51, unknown 19.0
Ventral tegmental area
nTPM: 23.9
2223 Female, age 72, unknown 25.1
2021 Male, age 53, unknown 24.5
1942 Male, age 51, unknown 24.2
2410 Female, age 72, unknown 23.7
1915 Female, age 42, unknown 23.3
2218 Male, age 76, both hemispheres 22.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 50.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 50.4
Samples: 139

Max nTPM: 264.9
Min nTPM: 7.5
Std nTPM: 33.2
Median nTPM: 44.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 264.9
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 170.7
GTEX-1I1GS-0011-R2b-SM-CMKHG 60-69 years, male 161.5
GTEX-OHPN-0011-R2A-SM-2I5FB 60-69 years, female 152.5
GTEX-QMR6-0011-R2A-SM-32PKV 50-59 years, male 133.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 118.1
GTEX-1GTWX-0011-R2b-SM-ADEH5 60-69 years, male 112.3
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 110.7
GTEX-14PJO-0011-R2a-SM-5ZZVF 60-69 years, male 105.5
GTEX-1LH75-0011-R2b-SM-EYYWQ 50-59 years, female 104.8
GTEX-1B996-0011-R2a-SM-7IGON 60-69 years, male 96.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 45.9
FF:10158-103A5 76 years, female 45.9

MIDBRAIN - Pig RNA-seqi
Average nTPM 0.6
Pig sample Sample description nTPM
Midbrain
nTPM: 0.3
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 0.4
Sample C Male 0.2
Sample D Male 0.3
Periaqueductal gray
nTPM: 0.6
Samples: 3

Max nTPM: 1.0
Min nTPM: 0.2
Sample B Female 1.0
Sample C Male 0.2
Sample D Male 0.7
Substantia nigra
nTPM: 0.3
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Female 0.2
Sample B Female 0.4
Sample C Male 0.0
Sample D Male 0.6
Superior colliculi
nTPM: 0.1
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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