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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:195.8 nTPM
HPA:195.8 nTPM
GTEx:184.0 nTPM
FANTOM5:149.5 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:29.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035638
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 195.8
Sample id Sample description nTPM
Hippocampus
nTPM: 188.0
1911 Female, age 85, right hemisphere 200.9
2529 Female, age 94, left hemisphere 196.0
2621 Female, age 67, right hemisphere 193.2
2148 Female, age 91, left hemisphere 183.4
1855 Male, age 76, left hemisphere 177.7
1898 Male, age 80, left hemisphere 176.7
Dentate gyrus
nTPM: 178.4
2530 Female, age 94, left hemisphere 188.9
2010 Male, age 76, both hemispheres 187.6
2528 Male, age 74, both hemispheres 180.8
2246 Female, age 85, both hemispheres 175.9
1927 Female, age 91, both hemispheres 172.6
2531 Female, age 67, both hemispheres 164.4
Entorhinal gyrus
nTPM: 178.4
2117 Female, age 91, right hemisphere 196.2
2764 Male, age 80, right hemisphere 193.1
1938 Female, age 85, left hemisphere 186.5
2613 Female, age 94, left hemisphere 167.7
1787 Male, age 76, left hemisphere 164.2
2686 Male, age 75, right hemisphere 162.5
Hippocampus, CA1
nTPM: 176.0
2527 Male, age 74, both hemispheres 195.2
1873 Female, age 85, both hemispheres 174.0
2749 Male, age 80, left hemisphere 173.0
2082 Female, age 91, right hemisphere 170.7
2045 Male, age 76, both hemispheres 166.9
Hippocampus, CA2
nTPM: 187.4
2249 Male, age 74, both hemispheres 221.2
1963 Male, age 80, left hemisphere 192.1
2437 Female, age 94, left hemisphere 188.2
1940 Female, age 85, left hemisphere 178.2
2113 Female, age 91, right hemisphere 176.9
1892 Male, age 76, both hemispheres 167.6
Hippocampus, CA3
nTPM: 179.1
1891 Female, age 85, both hemispheres 197.9
1867 Male, age 76, both hemispheres 189.5
2436 Male, age 74, both hemispheres 179.3
2620 Female, age 94, left hemisphere 176.1
2861 Female, age 67, both hemispheres 172.0
2137 Male, age 80, left hemisphere 159.8
Parahippocampal cortex
nTPM: 177.3
2018 Male, age 76, both hemispheres 195.1
1990 Female, age 91, right hemisphere 189.4
1933 Female, age 85, both hemispheres 184.4
2532 Female, age 72, left hemisphere 182.3
2692 Male, age 74, both hemispheres 181.9
2245 Female, age 91, both hemispheres 176.8
2622 Female, age 67, right hemisphere 166.7
2693 Female, age 94, both hemispheres 166.7
1850 Male, age 80, both hemispheres 166.1
2250 Female, age 67, right hemisphere 164.0
Perirhinal gyrus
nTPM: 161.7
2521 Female, age 94, right hemisphere 169.5
1847 Female, age 91, left hemisphere 162.0
1841 Female, age 85, right hemisphere 161.8
1794 Male, age 80, right hemisphere 158.2
2848 Male, age 76, right hemisphere 156.9
Subiculum
nTPM: 195.8
2042 Male, age 76, both hemispheres 213.0
1901 Male, age 80, both hemispheres 201.7
1977 Female, age 85, both hemispheres 200.3
2619 Male, age 74, both hemispheres 191.3
2438 Female, age 94, left hemisphere 186.5
2729 Female, age 91, right hemisphere 182.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.0
Samples: 197

Max nTPM: 535.6
Min nTPM: 48.4
Std nTPM: 86.1
Median nTPM: 164.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 535.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 462.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 461.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 438.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 397.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 376.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 370.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 360.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 359.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 355.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 350.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 149.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.5
FF:10169-103B7 60 years, female 153.8
FF:10153-102I9 76 years, female 145.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 23.6
Min nTPM: 11.8
Sample A Female 23.6
Sample B Female 17.3
Sample C Male 18.3
Sample D Male 11.8
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 21.9
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 21.9
Sample C Male 16.1
Sample D Male 14.7
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 18.5
Min nTPM: 13.6
Sample A Female 18.5
Sample B Female 18.1
Sample C Male 15.1
Sample D Male 13.6
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 17.7
Min nTPM: 16.4
Sample A Female 17.7
Sample B Female 16.4
Sample C Male 17.0
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 30.8
Min nTPM: 26.0
Sample A Male 29.0
Sample B Male 28.9
Sample C Female 30.8
Sample D Female 26.0
Hippocampal formation
nTPM: 29.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 27.6
Sample A Male 33.8
Sample B Male 27.9
Sample C Female 27.6
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69114097 Antisense, RP_050317_01_B07, Mouse strain C57BL/6J (56 days, male) 0.1

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