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HSF4
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:44.6 nTPM
HPA:44.6 nTPM
GTEx:16.3 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:4.1 nTPM
Mouse:4.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.6
Sample id Sample description nTPM
Hippocampus
nTPM: 43.0
2148 Female, age 91, left hemisphere 44.9
2529 Female, age 94, left hemisphere 44.1
1855 Male, age 76, left hemisphere 42.8
1911 Female, age 85, right hemisphere 42.4
2621 Female, age 67, right hemisphere 42.0
1898 Male, age 80, left hemisphere 41.6
Dentate gyrus
nTPM: 43.5
2531 Female, age 67, both hemispheres 44.9
2246 Female, age 85, both hemispheres 44.5
2528 Male, age 74, both hemispheres 44.2
2010 Male, age 76, both hemispheres 42.8
2530 Female, age 94, left hemisphere 42.2
1927 Female, age 91, both hemispheres 42.0
Entorhinal gyrus
nTPM: 43.7
2613 Female, age 94, left hemisphere 44.4
2686 Male, age 75, right hemisphere 44.4
2764 Male, age 80, right hemisphere 44.3
1787 Male, age 76, left hemisphere 43.7
2117 Female, age 91, right hemisphere 42.7
1938 Female, age 85, left hemisphere 42.5
Hippocampus, CA1
nTPM: 43.2
2045 Male, age 76, both hemispheres 45.3
2082 Female, age 91, right hemisphere 44.9
2527 Male, age 74, both hemispheres 43.0
1873 Female, age 85, both hemispheres 41.9
2749 Male, age 80, left hemisphere 40.8
Hippocampus, CA2
nTPM: 43.4
2437 Female, age 94, left hemisphere 45.9
2113 Female, age 91, right hemisphere 44.3
2249 Male, age 74, both hemispheres 44.0
1940 Female, age 85, left hemisphere 43.5
1892 Male, age 76, both hemispheres 41.9
1963 Male, age 80, left hemisphere 41.0
Hippocampus, CA3
nTPM: 43.9
2620 Female, age 94, left hemisphere 46.2
2436 Male, age 74, both hemispheres 45.5
2861 Female, age 67, both hemispheres 44.0
1891 Female, age 85, both hemispheres 43.9
2137 Male, age 80, left hemisphere 42.3
1867 Male, age 76, both hemispheres 41.4
Parahippocampal cortex
nTPM: 44.6
2622 Female, age 67, right hemisphere 46.7
2692 Male, age 74, both hemispheres 46.6
2693 Female, age 94, both hemispheres 45.6
1990 Female, age 91, right hemisphere 45.0
2532 Female, age 72, left hemisphere 44.8
2250 Female, age 67, right hemisphere 43.8
2018 Male, age 76, both hemispheres 43.7
2245 Female, age 91, both hemispheres 43.7
1850 Male, age 80, both hemispheres 42.9
1933 Female, age 85, both hemispheres 42.7
Perirhinal gyrus
nTPM: 43.2
2848 Male, age 76, right hemisphere 44.1
1841 Female, age 85, right hemisphere 43.6
2521 Female, age 94, right hemisphere 43.4
1794 Male, age 80, right hemisphere 42.9
1847 Female, age 91, left hemisphere 42.1
Subiculum
nTPM: 44.1
2619 Male, age 74, both hemispheres 46.2
2729 Female, age 91, right hemisphere 44.7
2438 Female, age 94, left hemisphere 43.9
2042 Male, age 76, both hemispheres 43.5
1977 Female, age 85, both hemispheres 43.3
1901 Male, age 80, both hemispheres 42.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 56.4
Min nTPM: 1.4
Std nTPM: 8.9
Median nTPM: 14.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 56.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 49.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 47.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 43.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 39.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 38.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 36.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 35.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 34.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.3
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 21.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 5.4
Min nTPM: 2.2
Sample A Female 4.4
Sample B Female 4.3
Sample C Male 5.4
Sample D Male 2.2
Entorhinal cortex
nTPM: 3.9
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.7
Sample A Female 5.2
Sample B Female 4.4
Sample C Male 2.7
Sample D Male 3.2
Subiculum
nTPM: 3.5
Samples: 4

Max nTPM: 3.8
Min nTPM: 3.2
Sample A Female 3.2
Sample B Female 3.3
Sample C Male 3.8
Sample D Male 3.5
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.6
Min nTPM: 2.8
Sample A Female 5.6
Sample B Female 2.8
Sample C Male 3.8
Sample D Male 3.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 6.7
Min nTPM: 3.0
Sample A Male 6.7
Sample B Male 5.1
Sample C Female 4.7
Sample D Female 3.0
Hippocampal formation
nTPM: 1.7
Samples: 4

Max nTPM: 3.2
Min nTPM: 0.2
Sample A Male 0.2
Sample B Male 2.3
Sample C Female 1.1
Sample D Female 3.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75214735 Antisense, RP_051130_01_A11, Mouse strain C57BL/6J (56 days, male) 0.4

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