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LYRM1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:27.1 nTPM
HPA:27.1 nTPM
GTEx:25.1 nTPM
FANTOM5:46.4 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:16.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.1
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1898 Male, age 80, left hemisphere 27.3
2529 Female, age 94, left hemisphere 25.6
1855 Male, age 76, left hemisphere 25.4
2148 Female, age 91, left hemisphere 25.2
1911 Female, age 85, right hemisphere 25.1
2621 Female, age 67, right hemisphere 24.8
Dentate gyrus
nTPM: 25.0
1927 Female, age 91, both hemispheres 26.3
2528 Male, age 74, both hemispheres 25.6
2246 Female, age 85, both hemispheres 25.1
2010 Male, age 76, both hemispheres 25.0
2530 Female, age 94, left hemisphere 24.5
2531 Female, age 67, both hemispheres 23.5
Entorhinal gyrus
nTPM: 26.2
1938 Female, age 85, left hemisphere 27.9
1787 Male, age 76, left hemisphere 26.7
2764 Male, age 80, right hemisphere 26.5
2686 Male, age 75, right hemisphere 25.6
2613 Female, age 94, left hemisphere 25.4
2117 Female, age 91, right hemisphere 25.1
Hippocampus, CA1
nTPM: 25.5
2527 Male, age 74, both hemispheres 25.8
2749 Male, age 80, left hemisphere 25.8
2082 Female, age 91, right hemisphere 25.7
1873 Female, age 85, both hemispheres 25.5
2045 Male, age 76, both hemispheres 24.7
Hippocampus, CA2
nTPM: 26.1
2249 Male, age 74, both hemispheres 28.4
1963 Male, age 80, left hemisphere 26.2
1892 Male, age 76, both hemispheres 26.1
1940 Female, age 85, left hemisphere 25.6
2113 Female, age 91, right hemisphere 25.2
2437 Female, age 94, left hemisphere 24.8
Hippocampus, CA3
nTPM: 25.5
2436 Male, age 74, both hemispheres 27.7
1867 Male, age 76, both hemispheres 26.4
2137 Male, age 80, left hemisphere 26.1
1891 Female, age 85, both hemispheres 25.2
2620 Female, age 94, left hemisphere 24.4
2861 Female, age 67, both hemispheres 23.1
Parahippocampal cortex
nTPM: 26.2
1850 Male, age 80, both hemispheres 27.6
2250 Female, age 67, right hemisphere 26.7
1933 Female, age 85, both hemispheres 26.6
1990 Female, age 91, right hemisphere 26.6
2018 Male, age 76, both hemispheres 26.5
2692 Male, age 74, both hemispheres 26.0
2693 Female, age 94, both hemispheres 25.7
2622 Female, age 67, right hemisphere 25.6
2532 Female, age 72, left hemisphere 25.3
2245 Female, age 91, both hemispheres 25.0
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 28.4
1841 Female, age 85, right hemisphere 27.6
1794 Male, age 80, right hemisphere 27.4
2848 Male, age 76, right hemisphere 26.2
2521 Female, age 94, right hemisphere 26.0
Subiculum
nTPM: 26.2
2438 Female, age 94, left hemisphere 28.2
2619 Male, age 74, both hemispheres 26.8
1901 Male, age 80, both hemispheres 26.2
1977 Female, age 85, both hemispheres 26.2
2042 Male, age 76, both hemispheres 25.3
2729 Female, age 91, right hemisphere 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.1
Samples: 197

Max nTPM: 66.2
Min nTPM: 13.3
Std nTPM: 6.6
Median nTPM: 23.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 53.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 42.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 41.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 39.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 38.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 36.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 35.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 35.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.4
FF:10169-103B7 60 years, female 59.6
FF:10153-102I9 76 years, female 33.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.7
Sample A Female 12.7
Sample B Female 9.7
Sample C Male 11.3
Sample D Male 8.7
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.9
Sample A Female 8.4
Sample B Female 10.6
Sample C Male 8.5
Sample D Male 6.9
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.8
Sample A Female 10.5
Sample B Female 9.4
Sample C Male 7.8
Sample D Male 7.9
Ventral hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.7
Sample A Female 8.5
Sample B Female 7.7
Sample C Male 9.2
Sample D Male 8.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.6
Sample A Male 17.0
Sample B Male 14.6
Sample C Female 16.7
Sample D Female 16.5
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.3
Sample A Male 18.3
Sample B Male 15.4
Sample C Female 11.3
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
564754 Antisense, RP_040826_01_C11, Mouse strain C57BL/6J (56 days, male) 0.2

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