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ZNF423
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.6 nTPM
HPA:9.6 nTPM
GTEx:7.8 nTPM
FANTOM5:7.3 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:15.9 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 9.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 5.2
2481 Female, age 94, left hemisphere 9.0
1854 Male, age 80, left hemisphere 5.7
1857 Female, age 85, left hemisphere 5.5
2290 Female, age 72, unknown 5.5
2289 Male, age 61, right hemisphere 5.1
2288 Male, age 75, left hemisphere 4.6
1781 Male, age 74, unknown 4.0
2846 Female, age 79, unknown 2.1
Claustrum
nTPM: 3.0
2568 Male, age 61, both hemispheres 4.6
2196 Female, age 79, unknown 4.3
2491 Male, age 75, both hemispheres 3.9
2645 Female, age 72, unknown 3.9
2284 Female, age 91, both hemispheres 3.3
2392 Female, age 94, both hemispheres 2.9
2198 Male, age 80, both hemispheres 2.3
1956 Male, age 74, unknown 1.3
2292 Female, age 85, both hemispheres 0.2
Globus pallidus, externus
nTPM: 9.3
1996 Male, age 80, right hemisphere 13.7
2646 Male, age 61, right hemisphere 12.9
2567 Female, age 72, unknown 10.1
2772 Female, age 79, unknown 7.2
2395 Male, age 75, both hemispheres 2.6
Globus pallidus, internus
nTPM: 8.0
2037 Male, age 80, right hemisphere 11.2
1818 Male, age 74, unknown 9.8
2483 Female, age 94, right hemisphere 9.5
2566 Female, age 72, unknown 7.7
2287 Male, age 75, right hemisphere 6.6
2111 Female, age 85, right hemisphere 5.8
2778 Female, age 91, both hemispheres 5.3
Nucleus accumbens
nTPM: 4.3
2732 Male, age 80, right hemisphere 6.0
2286 Male, age 75, left hemisphere 5.9
2698 Female, age 72, unknown 5.0
1806 Female, age 85, left hemisphere 4.3
2391 Female, age 94, left hemisphere 4.0
1783 Male, age 74, unknown 3.7
1856 Female, age 91, right hemisphere 2.9
2824 Male, age 61, right hemisphere 2.6
Nucleus basalis of Meynert
nTPM: 7.5
2569 Male, age 61, both hemispheres 16.1
2484 Female, age 94, left hemisphere 5.6
2393 Male, age 80, right hemisphere 4.2
2821 Male, age 75, both hemispheres 4.2
Nucleus of the diagonal band
nTPM: 7.9
1979 Male, age 74, unknown 21.2
2195 Female, age 85, both hemispheres 5.8
1812 Female, age 91, both hemispheres 4.9
2775 Male, age 80, right hemisphere 4.7
2029 Male, age 61, right hemisphere 2.8
Olfactory tubercle
nTPM: 5.0
2856 Male, age 75, right hemisphere 7.2
1846 Male, age 80, right hemisphere 5.5
2487 Female, age 94, left hemisphere 5.0
1998 Female, age 91, both hemispheres 2.2
Putamen
nTPM: 5.4
2647 Male, age 75, left hemisphere 10.9
2482 Female, age 94, left hemisphere 7.3
2489 Female, age 72, unknown 6.9
1829 Male, age 74, unknown 4.2
1838 Male, age 80, right hemisphere 3.7
1937 Female, age 91, right hemisphere 3.0
2466 Female, age 79, unknown 1.6
Septal nuclei
nTPM: 9.6
2199 Male, age 80, right hemisphere 23.7
2394 Male, age 61, left hemisphere 15.3
2059 Female, age 85, both hemispheres 10.7
2009 Female, age 91, both hemispheres 5.8
2629 Female, age 94, right hemisphere 5.3
1960 Male, age 74, unknown 4.2
2031 Female, age 72, unknown 2.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 7.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 7.8
Samples: 246

Max nTPM: 20.1
Min nTPM: 2.0
Std nTPM: 2.6
Median nTPM: 7.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 20.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 16.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 14.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 14.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 14.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 14.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 13.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 13.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 13.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 12.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.4
Samples: 246

Max nTPM: 19.2
Min nTPM: 2.7
Std nTPM: 2.8
Median nTPM: 6.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 19.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 17.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 15.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 14.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 14.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 14.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 14.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 13.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 13.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 13.2
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Brain - Putamen (basal ganglia)
Average nTPM: 7.2
Samples: 205

Max nTPM: 14.5
Min nTPM: 2.2
Std nTPM: 2.4
Median nTPM: 6.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 14.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 13.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 12.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 12.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 12.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 11.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 11.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 11.3
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 5.2
FF:10164-103B2 76 years, female 5.2
Globus pallidus
Scaled Tags Per Million: 6.3
FF:10161-103A8 76 years, female 7.9
FF:10175-103C4 60 years, female 4.7
Nucleus accumbens
Scaled Tags Per Million: 7.1
FF:10037-101F1 23-56 years, mixed 7.1
Putamen
Scaled Tags Per Million: 7.3
FF:10176-103C5 60 years, female 7.3

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Caudate
nTPM: 10.6
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.6
Sample A Female 10.7
Sample B Female 11.0
Sample C Male 11.9
Sample D Male 8.6
Putamen
nTPM: 8.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 6.7
Sample A Female 10.3
Sample B Female 6.7
Sample C Male 7.6
Sample D Male 8.4
Septum
nTPM: 17.6
Samples: 4

Max nTPM: 27.1
Min nTPM: 11.1
Sample A Female 11.1
Sample B Female 13.1
Sample C Male 18.9
Sample D Male 27.1
Ventral pallidum
nTPM: 11.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 8.5
Sample A Female 8.9
Sample B Female 8.5
Sample C Male 19.2
Sample D Male 9.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.9
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.1
Sample A Male 3.7
Sample B Male 4.7
Sample C Female 3.9
Sample D Female 3.1
Septum
nTPM: 15.9
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.9
Sample A Male 15.0
Sample B Male 16.6
Sample C Female 13.9
Sample D Female 18.1
Ventral forebrain
nTPM: 5.6
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.9
Sample A Male 4.9
Sample B Male 5.9
Sample C Female 6.1
Sample D Female 5.5

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
1608 Antisense, RP_Baylor_103314, Mouse strain C57BL/6J (56 days, male) 0.1
1607 Antisense, RP_Baylor_103314, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
1608 Antisense, RP_Baylor_103314, Mouse strain C57BL/6J (56 days, male) 0.0
1607 Antisense, RP_Baylor_103314, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.