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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:23.6 nTPM
HPA:23.6 nTPM
GTEx:21.2 nTPM
FANTOM5:42.2 Scaled Tags Per Million
Pig:4.9 nTPM
Mouse:7.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041791
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.9
1898 Male, age 80, left hemisphere 25.0
2148 Female, age 91, left hemisphere 23.0
1855 Male, age 76, left hemisphere 22.9
2529 Female, age 94, left hemisphere 22.6
2621 Female, age 67, right hemisphere 22.6
1911 Female, age 85, right hemisphere 21.2
Dentate gyrus
nTPM: 23.4
2530 Female, age 94, left hemisphere 27.5
2528 Male, age 74, both hemispheres 23.9
1927 Female, age 91, both hemispheres 23.7
2246 Female, age 85, both hemispheres 22.3
2010 Male, age 76, both hemispheres 22.2
2531 Female, age 67, both hemispheres 21.1
Entorhinal gyrus
nTPM: 23.5
2613 Female, age 94, left hemisphere 24.9
2764 Male, age 80, right hemisphere 24.7
1938 Female, age 85, left hemisphere 23.5
2686 Male, age 75, right hemisphere 23.3
2117 Female, age 91, right hemisphere 22.5
1787 Male, age 76, left hemisphere 22.1
Hippocampus, CA1
nTPM: 23.2
2749 Male, age 80, left hemisphere 26.8
2527 Male, age 74, both hemispheres 23.6
1873 Female, age 85, both hemispheres 22.7
2082 Female, age 91, right hemisphere 21.9
2045 Male, age 76, both hemispheres 21.0
Hippocampus, CA2
nTPM: 23.6
1963 Male, age 80, left hemisphere 25.9
2437 Female, age 94, left hemisphere 24.6
1892 Male, age 76, both hemispheres 24.5
2249 Male, age 74, both hemispheres 24.0
2113 Female, age 91, right hemisphere 21.5
1940 Female, age 85, left hemisphere 21.2
Hippocampus, CA3
nTPM: 22.6
2137 Male, age 80, left hemisphere 24.4
2861 Female, age 67, both hemispheres 23.3
1867 Male, age 76, both hemispheres 22.9
2436 Male, age 74, both hemispheres 22.3
1891 Female, age 85, both hemispheres 21.4
2620 Female, age 94, left hemisphere 21.2
Parahippocampal cortex
nTPM: 23.1
2245 Female, age 91, both hemispheres 25.1
2250 Female, age 67, right hemisphere 24.6
2532 Female, age 72, left hemisphere 24.3
1990 Female, age 91, right hemisphere 23.4
1850 Male, age 80, both hemispheres 22.8
2622 Female, age 67, right hemisphere 22.5
1933 Female, age 85, both hemispheres 22.4
2693 Female, age 94, both hemispheres 22.4
2692 Male, age 74, both hemispheres 22.3
2018 Male, age 76, both hemispheres 21.1
Perirhinal gyrus
nTPM: 23.3
1847 Female, age 91, left hemisphere 24.5
2521 Female, age 94, right hemisphere 23.5
1794 Male, age 80, right hemisphere 23.4
1841 Female, age 85, right hemisphere 23.1
2848 Male, age 76, right hemisphere 21.9
Subiculum
nTPM: 22.2
1901 Male, age 80, both hemispheres 23.1
2619 Male, age 74, both hemispheres 23.1
1977 Female, age 85, both hemispheres 23.0
2042 Male, age 76, both hemispheres 22.0
2729 Female, age 91, right hemisphere 21.2
2438 Female, age 94, left hemisphere 21.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 38.5
Min nTPM: 10.6
Std nTPM: 5.7
Median nTPM: 20.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 35.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 35.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 33.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 32.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 31.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.2
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.2
Sample A Female 5.8
Sample B Female 4.7
Sample C Male 5.0
Sample D Male 4.2
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.8
Sample A Female 4.8
Sample B Female 5.3
Sample C Male 4.2
Sample D Male 3.8
Subiculum
nTPM: 4.1
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.8
Sample A Female 4.6
Sample B Female 4.1
Sample C Male 3.8
Sample D Male 3.8
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.5
Sample A Female 4.1
Sample B Female 3.5
Sample C Male 5.1
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.2
Sample A Male 8.4
Sample B Male 6.7
Sample C Female 6.7
Sample D Female 5.2
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.6
Sample A Male 7.7
Sample B Male 6.7
Sample C Female 6.6
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68666655 Antisense, RP_050126_02_F11, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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