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HCFC1R1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:172.0 nTPM
HPA:172.0 nTPM
GTEx:184.4 nTPM
FANTOM5:195.6 Scaled Tags Per Million
Pig:33.3 nTPM
Mouse:210.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059647
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 172.0
Sample id Sample description nTPM
Hippocampus
nTPM: 160.7
1898 Male, age 80, left hemisphere 169.9
2621 Female, age 67, right hemisphere 166.9
1855 Male, age 76, left hemisphere 162.6
2529 Female, age 94, left hemisphere 157.2
1911 Female, age 85, right hemisphere 155.3
2148 Female, age 91, left hemisphere 152.4
Dentate gyrus
nTPM: 159.4
2530 Female, age 94, left hemisphere 167.4
1927 Female, age 91, both hemispheres 165.0
2246 Female, age 85, both hemispheres 162.5
2010 Male, age 76, both hemispheres 157.9
2528 Male, age 74, both hemispheres 153.9
2531 Female, age 67, both hemispheres 149.6
Entorhinal gyrus
nTPM: 172.0
2613 Female, age 94, left hemisphere 188.7
2764 Male, age 80, right hemisphere 175.4
1938 Female, age 85, left hemisphere 174.0
1787 Male, age 76, left hemisphere 169.2
2686 Male, age 75, right hemisphere 168.9
2117 Female, age 91, right hemisphere 155.5
Hippocampus, CA1
nTPM: 161.6
2749 Male, age 80, left hemisphere 176.1
2045 Male, age 76, both hemispheres 159.3
2082 Female, age 91, right hemisphere 159.1
2527 Male, age 74, both hemispheres 158.0
1873 Female, age 85, both hemispheres 155.5
Hippocampus, CA2
nTPM: 160.3
1892 Male, age 76, both hemispheres 175.7
2437 Female, age 94, left hemisphere 169.6
1940 Female, age 85, left hemisphere 158.8
2249 Male, age 74, both hemispheres 155.1
2113 Female, age 91, right hemisphere 152.5
1963 Male, age 80, left hemisphere 150.3
Hippocampus, CA3
nTPM: 160.4
2137 Male, age 80, left hemisphere 170.2
1867 Male, age 76, both hemispheres 168.7
2861 Female, age 67, both hemispheres 161.9
2620 Female, age 94, left hemisphere 159.8
1891 Female, age 85, both hemispheres 152.3
2436 Male, age 74, both hemispheres 149.8
Parahippocampal cortex
nTPM: 167.6
2245 Female, age 91, both hemispheres 185.6
1850 Male, age 80, both hemispheres 171.8
2692 Male, age 74, both hemispheres 170.4
2250 Female, age 67, right hemisphere 168.9
2622 Female, age 67, right hemisphere 168.0
1990 Female, age 91, right hemisphere 166.0
1933 Female, age 85, both hemispheres 165.1
2693 Female, age 94, both hemispheres 162.6
2532 Female, age 72, left hemisphere 160.0
2018 Male, age 76, both hemispheres 157.8
Perirhinal gyrus
nTPM: 170.6
1847 Female, age 91, left hemisphere 187.0
1794 Male, age 80, right hemisphere 170.9
2521 Female, age 94, right hemisphere 168.1
1841 Female, age 85, right hemisphere 164.3
2848 Male, age 76, right hemisphere 162.4
Subiculum
nTPM: 159.0
2619 Male, age 74, both hemispheres 167.1
1901 Male, age 80, both hemispheres 164.9
2438 Female, age 94, left hemisphere 162.0
1977 Female, age 85, both hemispheres 159.4
2042 Male, age 76, both hemispheres 156.7
2729 Female, age 91, right hemisphere 143.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 184.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 184.4
Samples: 197

Max nTPM: 533.2
Min nTPM: 53.7
Std nTPM: 67.6
Median nTPM: 174.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 533.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 406.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 385.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 376.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 363.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 352.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 346.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 340.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 337.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 314.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 308.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 195.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 195.6
FF:10169-103B7 60 years, female 232.2
FF:10153-102I9 76 years, female 159.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.5
Samples: 4

Max nTPM: 35.9
Min nTPM: 21.8
Sample A Female 35.9
Sample B Female 21.8
Sample C Male 30.0
Sample D Male 22.4
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 35.8
Min nTPM: 29.5
Sample A Female 31.4
Sample B Female 29.5
Sample C Male 35.8
Sample D Male 31.9
Subiculum
nTPM: 33.3
Samples: 4

Max nTPM: 50.5
Min nTPM: 25.8
Sample A Female 50.5
Sample B Female 27.3
Sample C Male 29.6
Sample D Male 25.8
Ventral hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 36.2
Min nTPM: 17.3
Sample A Female 25.0
Sample B Female 17.3
Sample C Male 36.2
Sample D Male 29.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 210.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 210.5
Samples: 4

Max nTPM: 228.5
Min nTPM: 197.1
Sample A Male 202.3
Sample B Male 213.9
Sample C Female 197.1
Sample D Female 228.5
Hippocampal formation
nTPM: 207.1
Samples: 4

Max nTPM: 220.4
Min nTPM: 181.7
Sample A Male 208.9
Sample B Male 181.7
Sample C Female 217.4
Sample D Female 220.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71529917 Antisense, RP_050915_01_C08, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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