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CIAO3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:17.6 nTPM
HPA:17.6 nTPM
GTEx:20.9 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:18.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040851
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
1898 Male, age 80, left hemisphere 17.9
2148 Female, age 91, left hemisphere 17.3
1855 Male, age 76, left hemisphere 16.9
2621 Female, age 67, right hemisphere 16.8
1911 Female, age 85, right hemisphere 16.7
2529 Female, age 94, left hemisphere 16.3
Dentate gyrus
nTPM: 17.0
2528 Male, age 74, both hemispheres 17.9
2010 Male, age 76, both hemispheres 17.2
1927 Female, age 91, both hemispheres 17.0
2531 Female, age 67, both hemispheres 16.9
2246 Female, age 85, both hemispheres 16.6
2530 Female, age 94, left hemisphere 16.5
Entorhinal gyrus
nTPM: 17.4
2764 Male, age 80, right hemisphere 18.9
1787 Male, age 76, left hemisphere 17.9
2686 Male, age 75, right hemisphere 17.5
2613 Female, age 94, left hemisphere 17.3
1938 Female, age 85, left hemisphere 16.9
2117 Female, age 91, right hemisphere 15.9
Hippocampus, CA1
nTPM: 17.6
2749 Male, age 80, left hemisphere 20.9
2527 Male, age 74, both hemispheres 18.0
2082 Female, age 91, right hemisphere 16.8
1873 Female, age 85, both hemispheres 16.6
2045 Male, age 76, both hemispheres 15.6
Hippocampus, CA2
nTPM: 17.2
1963 Male, age 80, left hemisphere 19.0
1892 Male, age 76, both hemispheres 17.9
2249 Male, age 74, both hemispheres 17.3
1940 Female, age 85, left hemisphere 17.0
2437 Female, age 94, left hemisphere 16.2
2113 Female, age 91, right hemisphere 15.6
Hippocampus, CA3
nTPM: 17.2
2137 Male, age 80, left hemisphere 20.1
1867 Male, age 76, both hemispheres 17.8
2620 Female, age 94, left hemisphere 17.3
2861 Female, age 67, both hemispheres 16.6
2436 Male, age 74, both hemispheres 16.2
1891 Female, age 85, both hemispheres 15.2
Parahippocampal cortex
nTPM: 16.6
1990 Female, age 91, right hemisphere 17.4
2622 Female, age 67, right hemisphere 17.4
2245 Female, age 91, both hemispheres 16.9
1933 Female, age 85, both hemispheres 16.8
1850 Male, age 80, both hemispheres 16.5
2532 Female, age 72, left hemisphere 16.4
2692 Male, age 74, both hemispheres 16.3
2018 Male, age 76, both hemispheres 16.1
2693 Female, age 94, both hemispheres 16.1
2250 Female, age 67, right hemisphere 16.0
Perirhinal gyrus
nTPM: 16.8
1794 Male, age 80, right hemisphere 18.2
1847 Female, age 91, left hemisphere 16.9
2521 Female, age 94, right hemisphere 16.8
1841 Female, age 85, right hemisphere 16.1
2848 Male, age 76, right hemisphere 16.1
Subiculum
nTPM: 16.5
1901 Male, age 80, both hemispheres 17.8
1977 Female, age 85, both hemispheres 17.2
2729 Female, age 91, right hemisphere 16.9
2619 Male, age 74, both hemispheres 16.8
2042 Male, age 76, both hemispheres 15.8
2438 Female, age 94, left hemisphere 14.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 35.2
Min nTPM: 7.5
Std nTPM: 4.6
Median nTPM: 20.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 34.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 30.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 30.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 29.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 29.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 7.0
Sample A Female 11.3
Sample B Female 8.8
Sample C Male 7.8
Sample D Male 7.0
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.9
Sample A Female 8.5
Sample B Female 8.1
Sample C Male 8.8
Sample D Male 7.9
Subiculum
nTPM: 8.2
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.3
Sample A Female 9.7
Sample B Female 7.7
Sample C Male 8.0
Sample D Male 7.3
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.4
Sample A Female 10.2
Sample B Female 7.4
Sample C Male 12.0
Sample D Male 9.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 18.6
Min nTPM: 16.8
Sample A Male 17.4
Sample B Male 17.6
Sample C Female 18.6
Sample D Female 16.8
Hippocampal formation
nTPM: 18.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 18.2
Sample A Male 19.6
Sample B Male 18.2
Sample C Female 18.6
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68667485 Antisense, RP_050201_02_D05, Mouse strain C57BL/6J (56 days, male) 0.2

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