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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:365.8 nTPM
HPA:365.8 nTPM
GTEx:421.6 nTPM
FANTOM5:60.7 Scaled Tags Per Million
Pig:133.8 nTPM
Mouse:486.9 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064006
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 365.8
Sample id Sample description nTPM
Hippocampus
nTPM: 355.1
1898 Male, age 80, left hemisphere 376.4
2529 Female, age 94, left hemisphere 362.9
1855 Male, age 76, left hemisphere 356.6
2621 Female, age 67, right hemisphere 351.4
1911 Female, age 85, right hemisphere 344.9
2148 Female, age 91, left hemisphere 338.1
Dentate gyrus
nTPM: 363.3
2530 Female, age 94, left hemisphere 395.1
2010 Male, age 76, both hemispheres 372.7
1927 Female, age 91, both hemispheres 360.6
2528 Male, age 74, both hemispheres 354.8
2246 Female, age 85, both hemispheres 353.1
2531 Female, age 67, both hemispheres 343.5
Entorhinal gyrus
nTPM: 342.3
2764 Male, age 80, right hemisphere 351.7
1787 Male, age 76, left hemisphere 349.4
1938 Female, age 85, left hemisphere 346.0
2117 Female, age 91, right hemisphere 341.7
2613 Female, age 94, left hemisphere 335.3
2686 Male, age 75, right hemisphere 329.6
Hippocampus, CA1
nTPM: 365.8
2749 Male, age 80, left hemisphere 402.8
2527 Male, age 74, both hemispheres 362.5
1873 Female, age 85, both hemispheres 360.2
2045 Male, age 76, both hemispheres 356.4
2082 Female, age 91, right hemisphere 347.0
Hippocampus, CA2
nTPM: 361.5
1963 Male, age 80, left hemisphere 384.1
2437 Female, age 94, left hemisphere 367.2
1892 Male, age 76, both hemispheres 366.7
2249 Male, age 74, both hemispheres 365.2
1940 Female, age 85, left hemisphere 344.9
2113 Female, age 91, right hemisphere 340.7
Hippocampus, CA3
nTPM: 353.4
2137 Male, age 80, left hemisphere 370.8
2436 Male, age 74, both hemispheres 358.0
2620 Female, age 94, left hemisphere 353.5
1867 Male, age 76, both hemispheres 353.1
2861 Female, age 67, both hemispheres 346.4
1891 Female, age 85, both hemispheres 338.5
Parahippocampal cortex
nTPM: 345.4
2245 Female, age 91, both hemispheres 363.0
1933 Female, age 85, both hemispheres 357.4
2532 Female, age 72, left hemisphere 352.7
1850 Male, age 80, both hemispheres 352.0
2018 Male, age 76, both hemispheres 347.6
2250 Female, age 67, right hemisphere 346.0
1990 Female, age 91, right hemisphere 344.5
2692 Male, age 74, both hemispheres 331.9
2622 Female, age 67, right hemisphere 330.9
2693 Female, age 94, both hemispheres 327.9
Perirhinal gyrus
nTPM: 353.3
1847 Female, age 91, left hemisphere 367.0
1794 Male, age 80, right hemisphere 363.2
1841 Female, age 85, right hemisphere 354.1
2521 Female, age 94, right hemisphere 344.6
2848 Male, age 76, right hemisphere 337.5
Subiculum
nTPM: 351.8
2438 Female, age 94, left hemisphere 367.1
1901 Male, age 80, both hemispheres 356.2
1977 Female, age 85, both hemispheres 355.8
2619 Male, age 74, both hemispheres 345.5
2729 Female, age 91, right hemisphere 343.4
2042 Male, age 76, both hemispheres 342.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 421.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 421.6
Samples: 197

Max nTPM: 930.9
Min nTPM: 193.1
Std nTPM: 123.4
Median nTPM: 403.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 930.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 930.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 818.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 800.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 746.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 732.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 707.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 666.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 662.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 658.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 657.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.7
FF:10169-103B7 60 years, female 70.1
FF:10153-102I9 76 years, female 51.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 133.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 133.8
Samples: 4

Max nTPM: 186.1
Min nTPM: 89.6
Sample A Female 186.1
Sample B Female 127.6
Sample C Male 131.8
Sample D Male 89.6
Entorhinal cortex
nTPM: 105.2
Samples: 4

Max nTPM: 123.1
Min nTPM: 83.5
Sample A Female 98.3
Sample B Female 116.0
Sample C Male 123.1
Sample D Male 83.5
Subiculum
nTPM: 101.6
Samples: 4

Max nTPM: 138.0
Min nTPM: 79.7
Sample A Female 138.0
Sample B Female 95.3
Sample C Male 93.4
Sample D Male 79.7
Ventral hippocampus
nTPM: 121.0
Samples: 4

Max nTPM: 146.7
Min nTPM: 83.6
Sample A Female 131.5
Sample B Female 83.6
Sample C Male 146.7
Sample D Male 122.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 486.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 478.4
Samples: 4

Max nTPM: 493.6
Min nTPM: 450.3
Sample A Male 450.3
Sample B Male 484.3
Sample C Female 485.3
Sample D Female 493.6
Hippocampal formation
nTPM: 486.9
Samples: 4

Max nTPM: 553.4
Min nTPM: 442.6
Sample A Male 455.6
Sample B Male 442.6
Sample C Female 496.1
Sample D Female 553.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
74822929 Antisense, RP_060321_01_A02, Mouse strain C57BL/6J (56 days, male) 9.8

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The Human Protein Atlas

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