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DNAJA3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.1 nTPM
HPA:16.1 nTPM
GTEx:20.0 nTPM
FANTOM5:53.1 Scaled Tags Per Million
Pig:20.5 nTPM
Mouse:57.5 nTPM
Allen mouse:6.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 16.1
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 15.7
2019 Male, age 18, unknown 17.1
2586 Male, age 75, left hemisphere 16.7
2666 Male, age 74, left hemisphere 16.1
1870 Female, age 42, unknown 16.0
1827 Male, age 72, unknown 15.9
2411 Female, age 72, unknown 15.9
1833 Male, age 53, unknown 15.3
2828 Female, age 72, unknown 15.1
1830 Male, age 51, unknown 15.0
2219 Male, age 76, both hemispheres 13.9
Dorsal raphe nucleus
nTPM: 15.7
2298 Female, age 72, unknown 16.3
1828 Male, age 53, unknown 16.0
2047 Male, age 72, unknown 15.7
2750 Male, age 76, both hemispheres 15.4
2016 Female, age 72, unknown 14.9
Inferior colliculus
nTPM: 15.8
2097 Female, age 72, unknown 16.5
1890 Male, age 53, unknown 16.1
1848 Female, age 42, unknown 15.8
2849 Male, age 72, unknown 15.0
Median raphe nucleus
nTPM: 15.1
2220 Male, age 76, midline 15.1
Pedunculopontine tegmental nucleus
nTPM: 14.5
2334 Male, age 80, both hemispheres 15.3
1921 Female, age 85, both hemispheres 15.1
2338 Male, age 61, both hemispheres 13.2
Periaquaductal grey, anterior
nTPM: 15.8
2502 Female, age 75, unknown 17.2
1947 Male, age 18, unknown 15.8
1795 Male, age 51, unknown 14.6
Periaquaductal grey, dorsal
nTPM: 14.8
1840 Male, age 53, unknown 14.9
2464 Female, age 72, unknown 14.9
2850 Male, age 76, both hemispheres 14.7
1831 Male, age 72, unknown 14.6
Periaquaductal grey, lateral
nTPM: 14.4
2272 Male, age 74, both hemispheres 14.8
2053 Male, age 18, unknown 14.6
2140 Male, age 76, both hemispheres 13.9
Pretectal area
nTPM: 16.0
1817 Female, age 42, unknown 18.0
2007 Male, age 72, unknown 18.0
1944 Female, age 72, unknown 16.9
1816 Male, age 51, unknown 16.6
2667 Female, age 75, unknown 16.6
1815 Male, age 53, unknown 16.5
2273 Male, age 74, both hemispheres 15.1
2825 Male, age 18, unknown 15.0
2224 Female, age 72, unknown 14.8
2407 Male, age 75, both hemispheres 14.6
2316 Male, age 76, right hemisphere 13.9
Red nucleus
nTPM: 16.1
1821 Female, age 72, unknown 17.5
1865 Male, age 51, unknown 17.0
1954 Female, age 42, unknown 16.6
2588 Male, age 74, left hemisphere 16.6
2785 Male, age 18, unknown 16.5
1904 Male, age 53, unknown 16.0
2769 Male, age 72, unknown 15.8
2584 Male, age 75, left hemisphere 15.7
2227 Male, age 72, unknown 15.6
2503 Female, age 72, unknown 15.6
2725 Female, age 75, unknown 15.3
2823 Male, age 76, right hemisphere 15.3
Substantia nigra
nTPM: 16.1
1916 Female, age 42, unknown 17.2
1889 Female, age 72, unknown 17.1
1851 Male, age 51, unknown 16.6
2583 Male, age 75, right hemisphere 16.5
1941 Male, age 53, unknown 16.4
2241 Male, age 72, unknown 15.8
2590 Female, age 75, unknown 15.7
2665 Male, age 74, both hemispheres 15.6
2699 Male, age 18, unknown 15.3
2409 Female, age 72, unknown 14.6
Superior colliculus
nTPM: 15.5
2087 Female, age 72, unknown 16.5
1796 Male, age 53, unknown 16.1
1895 Male, age 76, right hemisphere 15.9
1839 Male, age 51, unknown 15.7
2587 Male, age 74, left hemisphere 15.6
1913 Female, age 42, unknown 15.4
1995 Male, age 72, unknown 15.4
2261 Male, age 18, unknown 15.3
2668 Female, age 75, unknown 14.7
2664 Male, age 75, both hemispheres 14.4
Ventral tegmental area
nTPM: 15.8
2410 Female, age 72, unknown 16.9
1915 Female, age 42, unknown 16.5
2218 Male, age 76, both hemispheres 16.3
2223 Female, age 72, unknown 15.5
1942 Male, age 51, unknown 15.3
2021 Male, age 53, unknown 14.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 20.0
Samples: 139

Max nTPM: 38.0
Min nTPM: 9.7
Std nTPM: 4.3
Median nTPM: 19.4
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 38.0
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 33.4
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 29.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 29.5
GTEX-13NYS-0011-R2b-SM-5MR4G 60-69 years, male 28.9
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 28.8
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 27.6
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 26.9
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 26.7
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 26.1
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 25.8
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 53.1
FF:10158-103A5 76 years, female 53.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 20.5
Pig sample Sample description nTPM
Midbrain
nTPM: 19.8
Samples: 4

Max nTPM: 23.3
Min nTPM: 16.7
Sample A Female 20.4
Sample B Female 16.7
Sample C Male 23.3
Sample D Male 18.6
Periaqueductal gray
nTPM: 15.7
Samples: 3

Max nTPM: 17.6
Min nTPM: 14.1
Sample B Female 15.3
Sample C Male 17.6
Sample D Male 14.1
Substantia nigra
nTPM: 19.2
Samples: 4

Max nTPM: 23.2
Min nTPM: 15.1
Sample A Female 23.2
Sample B Female 15.1
Sample C Male 21.2
Sample D Male 17.4
Superior colliculi
nTPM: 20.5
Samples: 4

Max nTPM: 24.4
Min nTPM: 15.1
Sample A Female 22.5
Sample B Female 15.1
Sample C Male 24.4
Sample D Male 19.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 57.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 57.5
Samples: 4

Max nTPM: 59.5
Min nTPM: 55.9
Sample A Male 55.9
Sample B Male 56.7
Sample C Female 59.5
Sample D Female 57.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 6.5
68443441 Antisense, RP_050111_02_A04, Mouse strain C57BL/6J (56 days, male) 6.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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