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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:73.6 nTPM
HPA:73.6 nTPM
GTEx:65.6 nTPM
FANTOM5:38.7 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:76.7 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056597
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.6
Sample id Sample description nTPM
Hippocampus
nTPM: 71.3
1898 Male, age 80, left hemisphere 77.8
1855 Male, age 76, left hemisphere 73.0
2148 Female, age 91, left hemisphere 72.8
2621 Female, age 67, right hemisphere 72.4
2529 Female, age 94, left hemisphere 67.2
1911 Female, age 85, right hemisphere 64.7
Dentate gyrus
nTPM: 70.3
2530 Female, age 94, left hemisphere 75.2
1927 Female, age 91, both hemispheres 73.3
2531 Female, age 67, both hemispheres 70.6
2010 Male, age 76, both hemispheres 70.3
2528 Male, age 74, both hemispheres 67.9
2246 Female, age 85, both hemispheres 64.7
Entorhinal gyrus
nTPM: 73.5
2613 Female, age 94, left hemisphere 78.5
2764 Male, age 80, right hemisphere 78.0
2686 Male, age 75, right hemisphere 73.8
1938 Female, age 85, left hemisphere 72.1
1787 Male, age 76, left hemisphere 71.2
2117 Female, age 91, right hemisphere 67.1
Hippocampus, CA1
nTPM: 70.9
2749 Male, age 80, left hemisphere 79.9
1873 Female, age 85, both hemispheres 73.5
2045 Male, age 76, both hemispheres 68.6
2082 Female, age 91, right hemisphere 66.3
2527 Male, age 74, both hemispheres 66.0
Hippocampus, CA2
nTPM: 70.1
1963 Male, age 80, left hemisphere 79.2
1892 Male, age 76, both hemispheres 77.8
2437 Female, age 94, left hemisphere 71.0
2113 Female, age 91, right hemisphere 65.8
1940 Female, age 85, left hemisphere 64.3
2249 Male, age 74, both hemispheres 62.7
Hippocampus, CA3
nTPM: 70.8
2861 Female, age 67, both hemispheres 80.1
2620 Female, age 94, left hemisphere 74.2
2137 Male, age 80, left hemisphere 70.0
1867 Male, age 76, both hemispheres 69.6
1891 Female, age 85, both hemispheres 65.9
2436 Male, age 74, both hemispheres 64.8
Parahippocampal cortex
nTPM: 69.4
2622 Female, age 67, right hemisphere 74.1
1850 Male, age 80, both hemispheres 74.0
2693 Female, age 94, both hemispheres 70.2
1990 Female, age 91, right hemisphere 69.7
1933 Female, age 85, both hemispheres 69.5
2532 Female, age 72, left hemisphere 69.5
2692 Male, age 74, both hemispheres 69.5
2245 Female, age 91, both hemispheres 67.5
2250 Female, age 67, right hemisphere 65.7
2018 Male, age 76, both hemispheres 64.1
Perirhinal gyrus
nTPM: 73.6
1794 Male, age 80, right hemisphere 78.4
1847 Female, age 91, left hemisphere 76.9
1841 Female, age 85, right hemisphere 73.7
2848 Male, age 76, right hemisphere 69.8
2521 Female, age 94, right hemisphere 69.2
Subiculum
nTPM: 67.0
1977 Female, age 85, both hemispheres 70.0
2619 Male, age 74, both hemispheres 69.1
2438 Female, age 94, left hemisphere 67.5
1901 Male, age 80, both hemispheres 67.4
2729 Female, age 91, right hemisphere 64.9
2042 Male, age 76, both hemispheres 63.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.6
Samples: 197

Max nTPM: 102.7
Min nTPM: 31.8
Std nTPM: 14.2
Median nTPM: 65.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 102.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 102.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 101.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 100.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 98.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 96.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 96.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 95.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 93.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 92.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 91.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.7
FF:10153-102I9 76 years, female 41.8
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 33.1
Min nTPM: 21.1
Sample A Female 33.1
Sample B Female 30.3
Sample C Male 21.1
Sample D Male 21.4
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 19.5
Sample A Female 22.9
Sample B Female 24.1
Sample C Male 22.2
Sample D Male 19.5
Subiculum
nTPM: 23.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 19.6
Sample A Female 25.9
Sample B Female 24.4
Sample C Male 19.6
Sample D Male 22.1
Ventral hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 33.4
Min nTPM: 19.2
Sample A Female 26.5
Sample B Female 19.2
Sample C Male 33.4
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.7
Samples: 4

Max nTPM: 87.3
Min nTPM: 63.7
Sample A Male 63.7
Sample B Male 66.2
Sample C Female 73.7
Sample D Female 87.3
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 90.7
Min nTPM: 65.1
Sample A Male 68.9
Sample B Male 65.1
Sample C Female 82.0
Sample D Female 90.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
76098296 Antisense, RP_060626_01_E07, Mouse strain C57BL/6J (56 days, male) 9.0

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